RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.59□□□□□ -1.35
VPS36-202ENST00000462289 UPF3AQ9H1J1 476 aaKnown RBP6.59□□□□□ -1.35
VPS36-202ENST00000462289 ABHD16BQ9H3Z7 469 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 RIC8AQ9NPQ8 531 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 PXMP2Q9NR77 195 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 ADD3Q9UEY8 706 aaKnown RBP6.59□□□□□ -1.35
VPS36-202ENST00000462289 GNEQ9Y223 722 aaKnown RBP6.59□□□□□ -1.35
VPS36-202ENST00000462289 Q9Y3F1 56 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 RNF114Q9Y508 228 aa6.59□□□□□ -1.35
VPS36-202ENST00000462289 MYH9P35579 1960 aaKnown RBP6.58□□□□□ -1.36
VPS36-202ENST00000462289 MYH15Q9Y2K3 1946 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 GPR182O15218 404 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 DEXIO95424 95 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 SGPL1O95470 568 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 CCL5P13501 91 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 CCND3P30281 292 aaPredicted RBP6.58□□□□□ -1.36
VPS36-202ENST00000462289 ICAM3P32942 547 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 CYP2C19P33261 490 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 MCM2P49736 904 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 UBXN2AP68543 259 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 MRPS9P82933 396 aaKnown RBP6.58□□□□□ -1.36
VPS36-202ENST00000462289 CYP27A1Q02318 531 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 AP3B2Q13367 1082 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 USH1GQ495M9 461 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 MFSD14CQ5VZR4 134 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 GALNT17Q6IS24 598 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 DYMQ7RTS9 669 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 DPP9Q86TI2 863 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 ANKRD35Q8N283 1001 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 KLHDC9Q8NEP7 349 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 IL31RAQ8NI17 732 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 NSUN6Q8TEA1 469 aaKnown RBP6.58□□□□□ -1.36
VPS36-202ENST00000462289 PHKBQ93100 1093 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 CHMP4CQ96CF2 233 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 DDX11Q96FC9 970 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 MBOAT7Q96N66 472 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 TAAR1Q96RJ0 339 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 PHF20Q9BVI0 1012 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 GLT8D2Q9H1C3 349 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 VAT1LQ9HCJ6 419 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 VTA1Q9NP79 307 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 C1GALT1Q9NS00 363 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 HOMER2Q9NSB8 354 aa6.58□□□□□ -1.36
VPS36-202ENST00000462289 LTBP2Q14767 1821 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 TRIP12Q14669 1992 aaPredicted RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 GCOM1H8Y6P7 765 aaPredicted RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 EIF1AYO14602 144 aaKnown RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 DHX16O60231 1041 aaKnown RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 DUSP11O75319 330 aaKnown RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 STAM2O75886 525 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 CDKL5O76039 1030 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 FOSP01100 380 aaPredicted RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 CYP3A4P08684 503 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 POLR2MP0CAP2 368 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 TGFB3P10600 412 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 RAB6AP20340 208 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 CIITAP33076 1130 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 SREBF1P36956 1147 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 CCT2P78371 535 aaKnown RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 ACVR2BQ13705 512 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 SNX17Q15036 470 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 PGM5Q15124 567 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 DUSP28Q4G0W2 176 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 PCNX4Q63HM2 1172 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 MCTP2Q6DN12 878 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 USP17L6PQ6QN14 398 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 NSMFQ6X4W1 530 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 HOMER1Q86YM7 354 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 GLIS3Q8NEA6 775 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 U2AF1L4Q8WU68 220 aaKnown RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 CCDC74AQ96AQ1 378 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 ALKBH8Q96BT7 664 aaKnown RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 TMX3Q96JJ7 454 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 RMDN3Q96TC7 470 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 SLKQ9H2G2 1235 aaPredicted RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 PSTPIP2Q9H939 334 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 UPF2Q9HAU5 1272 aaKnown RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 RAD18Q9NS91 495 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 SEC63Q9UGP8 760 aaKnown RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 DDX20Q9UHI6 824 aaKnown RBP6.57□□□□□ -1.36
VPS36-202ENST00000462289 AP4E1Q9UPM8 1137 aa6.57□□□□□ -1.36
VPS36-202ENST00000462289 LAMA3Q16787 3333 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 KAT6AQ92794 2004 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 IGLV3-22A0A075B6J6 115 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 CYP3A7-CYP3A51PA0A087WV96 503 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 hCG_1642624A0A1W2PR95 340 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 NKRFO15226 690 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS36-202ENST00000462289 EIF3JO75822 258 aaKnown RBP6.56□□□□□ -1.36
VPS36-202ENST00000462289 AKR1A1P14550 325 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 CYP3A7P24462 503 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 HOXA13P31271 388 aaPredicted RBP6.56□□□□□ -1.36
VPS36-202ENST00000462289 ASPAP45381 313 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 MRPL12P52815 198 aaKnown RBP6.56□□□□□ -1.36
VPS36-202ENST00000462289 GJA9P57773 515 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 FGD1P98174 961 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 COL19A1Q14993 1142 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 CCDC144BQ3MJ40 725 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 IQSEC1Q6DN90 963 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 MOXD1Q6UVY6 613 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 ZNF765Q7L2R6 523 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms