RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 CAPSQ13938 189 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 DHX8Q14562 1220 aaKnown RBP9.03□□□□□ -0.96
SSR1-203ENST00000462112 HSP90AA2PQ14568 343 aaPredicted RBP9.03□□□□□ -0.96
SSR1-203ENST00000462112 KARSQ15046 597 aaKnown RBP9.03□□□□□ -0.96
SSR1-203ENST00000462112 PTPROQ16827 1216 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 GLB1LQ6UWU2 654 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.03□□□□□ -0.96
SSR1-203ENST00000462112 GPBP1Q86WP2 473 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 KSR1Q8IVT5 923 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 CMTR2Q8IYT2 770 aaKnown RBP9.03□□□□□ -0.96
SSR1-203ENST00000462112 CEP57L1Q8IYX8 460 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 RNF169Q8NCN4 708 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 URGCPQ8TCY9 931 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 TMEM40Q8WWA1 233 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 LRCH3Q96II8 777 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 ZNF668Q96K58 619 aaPredicted RBP9.03□□□□□ -0.96
SSR1-203ENST00000462112 MMTAG2Q9BU76 263 aaKnown RBP9.03□□□□□ -0.96
SSR1-203ENST00000462112 TRAIPQ9BWF2 469 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 NKX2-4Q9H2Z4 354 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 ZHX3Q9H4I2 956 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 CDHR5Q9HBB8 845 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 IFT122Q9HBG6 1241 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 PARVGQ9HBI0 331 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 XPNPEP1Q9NQW7 623 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 AGPAT5Q9NUQ2 364 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 KANSL3Q9P2N6 904 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 RCOR1Q9UKL0 485 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 PCDHB12Q9Y5F1 795 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 CNTNAP2Q9UHC6 1331 aa9.03□□□□□ -0.96
SSR1-203ENST00000462112 A0A087WWV3 80 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.02□□□□□ -0.97
SSR1-203ENST00000462112 GRXCR1A8MXD5 290 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 C9IYK1 514 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 HIP1RO75146 1068 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 ZMYND10O75800 440 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 DGKIO75912 1065 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 PRKCBP05771 671 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 RB1P06400 928 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 CA3P07451 260 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 C7P10643 843 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 PLS3P13797 630 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 LIG1P18858 919 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 RABGGTBP53611 331 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 PEX3P56589 373 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 FAM189BP81408 668 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 HTRA4P83105 476 aaPredicted RBP9.02□□□□□ -0.97
SSR1-203ENST00000462112 RNASELQ05823 741 aaKnown RBP9.02□□□□□ -0.97
SSR1-203ENST00000462112 FAM187BQ17R55 369 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 NAALADL2Q58DX5 795 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 ADALQ6DHV7 355 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 SLC27A1Q6PCB7 646 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 C1orf186Q6ZWK4 172 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 CCDC65Q8IXS2 484 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 MYCT1Q8N699 235 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 SPIRE2Q8WWL2 714 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 PPP2R3CQ969Q6 453 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 EPSTI1Q96J88 318 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 CLIC6Q96NY7 704 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 PNMA5Q96PV4 448 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 FAM193BQ96PV7 902 aaPredicted RBP9.02□□□□□ -0.97
SSR1-203ENST00000462112 TCHPQ9BT92 498 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 C11orf84Q9BUA3 381 aaPredicted RBP9.02□□□□□ -0.97
SSR1-203ENST00000462112 MRPL4Q9BYD3 311 aaKnown RBP9.02□□□□□ -0.97
SSR1-203ENST00000462112 TMEM117Q9H0C3 514 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 SEMA6BQ9H3T3 888 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 TMEM134Q9H6X4 195 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 FAM105AQ9NUU6 356 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 SEL1LQ9UBV2 794 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 STK39Q9UEW8 545 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 HOOK1Q9UJC3 728 aaKnown RBP9.02□□□□□ -0.97
SSR1-203ENST00000462112 METRNQ9UJH8 293 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 EXOC7Q9UPT5 735 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.02□□□□□ -0.97
SSR1-203ENST00000462112 ARID2Q68CP9 1835 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 TET1Q8NFU7 2136 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 ADGRA3Q8IWK6 1321 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 MICAL3Q7RTP6 2002 aa9.02□□□□□ -0.97
SSR1-203ENST00000462112 SOX1O00570 391 aaPredicted RBP9.01□□□□□ -0.97
SSR1-203ENST00000462112 ACKR2O00590 384 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 LPXNO60711 386 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 ZNF623O75123 536 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 ITGA4P13612 1032 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 LAG3P18627 525 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 PPM1AP35813 382 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 MATR3P43243 847 aaKnown RBP eCLIP9.01□□□□□ -0.97
SSR1-203ENST00000462112 YARSP54577 528 aaKnown RBP9.01□□□□□ -0.97
SSR1-203ENST00000462112 SLC12A3P55017 1021 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 ALCAMQ13740 583 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 MCM6Q14566 821 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 DSC3Q14574 896 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 ECM1Q16610 540 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 KYAT1Q16773 422 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 DCAF4L1Q3SXM0 396 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 SPECC1Q5M775 1068 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 CDCA2Q69YH5 1023 aaPredicted RBP9.01□□□□□ -0.97
SSR1-203ENST00000462112 KANK3Q6NY19 840 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 ECHDC2Q86YB7 292 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 FAM178BQ8IXR5 827 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 LRRC43Q8N309 656 aa9.01□□□□□ -0.97
SSR1-203ENST00000462112 PDILTQ8N807 584 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms