RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 HAND2P61296 217 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 MAP2K1Q02750 393 aaPredicted RBP9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 SNAPC2Q13487 334 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 PPP2R5DQ14738 602 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 CCL15Q16663 113 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 TRIM61Q5EBN2 209 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 KIAA1755Q5JYT7 1200 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 TBC1D10CQ8IV04 446 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 GIMAP7Q8NHV1 300 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 LSG1Q9H089 658 aaKnown RBP9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 NKX2-4Q9H2Z4 354 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 GREB1LQ9C091 1923 aaPredicted RBP9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 HTTP42858 3142 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 PRR33A8MZF0 331 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 PRAMEF1O95521 474 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 ZNF865P0CJ78 1059 aaPredicted RBP9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 HSPA8P11142 646 aaKnown RBP9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 CETPP11597 493 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 KIR3DL1P43629 444 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 HMGCS2P54868 508 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 INHBEP58166 350 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 CAP1Q01518 475 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 CYP4F3Q08477 520 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 SREBF2Q12772 1141 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 RAB3GAP1Q15042 981 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 FAM47AQ5JRC9 791 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 TREML2Q5T2D2 321 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 OGFOD3Q6PK18 319 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 ZAR1Q86SH2 424 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 CD163Q86VB7 1156 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 MAP4K1Q92918 833 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 KCNH3Q9ULD8 1083 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 PTPRFP10586 1907 aa9.42□□□□□ -0.9
ECHDC1-212ENST00000461239 NEDD4P46934 1319 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 SHISA3A0PJX4 238 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 ORC4O43929 436 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 TBC1D8O95759 1140 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 CBX7O95931 251 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 CYP21A2P08686 494 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 MYCLP1P12525 358 aaPredicted RBP9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 STAT3P40763 770 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 BACE1P56817 501 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 MAP4K2Q12851 820 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 TMEM179Q6ZVK1 233 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 AMOTL1Q8IY63 956 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 SHISA5Q8N114 240 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 STAG1Q8WVM7 1258 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 RUFY2Q8WXA3 655 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 C1orf159Q96HA4 380 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 CCDC17Q96LX7 622 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 MKNK2Q9HBH9 465 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 IL17RBQ9NRM6 502 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 CHST7Q9NS84 486 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 SAGE1Q9NXZ1 904 aa9.41□□□□□ -0.9
ECHDC1-212ENST00000461239 PLIN4Q96Q06 1357 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 ADGRA2Q96PE1 1338 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 HMX2A2RU54 273 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 H0Y8X5 98 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 PDHXO00330 501 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 MPHOSPH10O00566 681 aaKnown RBP9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 CA12O43570 354 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 NMT2O60551 498 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 SCG5P05408 212 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 EEF2P13639 858 aaKnown RBP9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 POU3F3P20264 500 aaPredicted RBP9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 CTSKP43235 329 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 NOVP48745 357 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 TFAP4Q01664 338 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 CRHR2Q13324 411 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 NTRK3Q16288 839 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 AKNAD1Q5T1N1 836 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 STOX1Q6ZVD7 989 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 ANKRD23Q86SG2 305 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 C12orf42Q96LP6 360 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 TBC1D32Q96NH3 1257 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 KIAA1683Q9H0B3 1180 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 C7orf69Q9H7B7 122 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 TRIM39Q9HCM9 518 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 CABP5Q9NP86 173 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 SFMBT1Q9UHJ3 866 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 GTF2IRD1Q9UHL9 959 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 GPR55Q9Y2T6 319 aaPredicted RBP9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 SF3B6Q9Y3B4 125 aaKnown RBP9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 CAPN6Q9Y6Q1 641 aa9.4□□□□□ -0.9
ECHDC1-212ENST00000461239 ZNF213O14771 459 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 CYP2C8P10632 490 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 HOXC12P31275 282 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 LBX1P52954 281 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 AMPD2Q01433 879 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 ICA1Q05084 483 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 TNK2Q07912 1038 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 NECTIN1Q15223 517 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 SLC35F1Q5T1Q4 408 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 GADL1Q6ZQY3 521 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 ZNF444Q8N0Y2 327 aaPredicted RBP9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 TMEM145Q8NBT3 493 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 GSTCDQ8NEC7 633 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 SLC7A14Q8TBB6 771 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 KCTD13Q8WZ19 329 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 CEP95Q96GE4 821 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms