RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 GNPTABQ3T906 1256 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 RFFLQ8WZ73 363 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 ARHGEF2Q92974 986 aaKnown RBP16.67■□□□□ 0.26
SSR4-206ENST00000460616 PIGSQ96S52 555 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 TMX4Q9H1E5 349 aaPredicted RBP16.67■□□□□ 0.26
SSR4-206ENST00000460616 PAPOLBQ9NRJ5 636 aaKnown RBP16.67■□□□□ 0.26
SSR4-206ENST00000460616 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.67■□□□□ 0.26
SSR4-206ENST00000460616 KLHL14Q9P2G3 628 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 NKX1-2Q9UD57 310 aaPredicted RBP16.67■□□□□ 0.26
SSR4-206ENST00000460616 AJAP1Q9UKB5 411 aaPredicted RBP16.67■□□□□ 0.26
SSR4-206ENST00000460616 COL4A5P29400 1685 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 GFPT2O94808 682 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 GNAZP19086 355 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 ABCB4P21439 1286 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 CHRNA3P32297 505 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 SKIV2L2P42285 1042 aaKnown RBP16.67■□□□□ 0.26
SSR4-206ENST00000460616 DCAF17Q5H9S7 520 aaPredicted RBP16.67■□□□□ 0.26
SSR4-206ENST00000460616 USP17L2Q6R6M4 530 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 FBF1Q8TES7 1133 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 CTNNBL1Q8WYA6 563 aaPredicted RBP16.67■□□□□ 0.26
SSR4-206ENST00000460616 RMDN2Q96LZ7 410 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 SYT17Q9BSW7 474 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 ZHX3Q9H4I2 956 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 MLXIPLQ9NP71 852 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 KCNK9Q9NPC2 374 aa16.67■□□□□ 0.26
SSR4-206ENST00000460616 CCDC88AQ3V6T2 1871 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 LRRD1A4D1F6 860 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 E9PMD0 336 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 EDIL3O43854 480 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 PHF2O75151 1096 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 UNC5CO95185 931 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 TMEM253P0C7T8 217 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 CREB1P16220 341 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 PLCG2P16885 1265 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 PRDX5P30044 214 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 PCK1P35558 622 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 SNX1Q13596 522 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 EPHA7Q15375 998 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 LONRF1Q17RB8 773 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 DOK7Q18PE1 504 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 ANO7Q6IWH7 933 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 GJB7Q6PEY0 223 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 GLYCTKQ8IVS8 523 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 ANKRD42Q8N9B4 389 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 SLC30A5Q8TAD4 765 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 LNX1Q8TBB1 728 aaPredicted RBP16.66■□□□□ 0.26
SSR4-206ENST00000460616 CKAP2Q8WWK9 683 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 RUNDC3BQ96NL0 473 aa16.66■□□□□ 0.26
SSR4-206ENST00000460616 MARCH6O60337 910 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 CALB2P22676 271 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 RAB27AP51159 221 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 TCERG1LQ5VWI1 586 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 LMNTD2Q8IXW0 634 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 ALG3Q92685 438 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 TAOK3Q9H2K8 898 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 SIX2Q9NPC8 291 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 PLA2G4BP0C869 781 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 VCAM1P19320 739 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 LMNB1P20700 586 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 STAT1P42224 750 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 MXRA7P84157 204 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 AOC3Q16853 763 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 C15orf52Q6ZUT6 534 aaKnown RBP16.65■□□□□ 0.26
SSR4-206ENST00000460616 GPBP1Q86WP2 473 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 CCDC25Q86WR0 208 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 SLC17A8Q8NDX2 589 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 GDAP1Q8TB36 358 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 NT5C3AQ9H0P0 336 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 RNPEPL1Q9HAU8 725 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 TMOD4Q9NZQ9 345 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 KIAA1024Q9UPX6 916 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 NCANO14594 1321 aa16.65■□□□□ 0.26
SSR4-206ENST00000460616 ESYT2A0FGR8 921 aa16.64■□□□□ 0.26
SSR4-206ENST00000460616 E7ENQ6 273 aa16.64■□□□□ 0.26
SSR4-206ENST00000460616 KRT18P05783 430 aaKnown RBP16.64■□□□□ 0.26
SSR4-206ENST00000460616 MRPS35P82673 323 aaKnown RBP16.64■□□□□ 0.26
SSR4-206ENST00000460616 TRAF1Q13077 416 aa16.64■□□□□ 0.26
SSR4-206ENST00000460616 RNF43Q68DV7 783 aa16.64■□□□□ 0.26
SSR4-206ENST00000460616 CWF19L1Q69YN2 538 aaKnown RBP16.64■□□□□ 0.26
SSR4-206ENST00000460616 AADACL2Q6P093 401 aa16.64■□□□□ 0.26
SSR4-206ENST00000460616 VSTM1Q6UX27 236 aa16.64■□□□□ 0.26
SSR4-206ENST00000460616 PRELID2Q8N945 189 aa16.64■□□□□ 0.26
SSR4-206ENST00000460616 GJA10Q969M2 543 aa16.64■□□□□ 0.26
SSR4-206ENST00000460616 UTP4Q969X6 686 aaKnown RBP16.64■□□□□ 0.26
SSR4-206ENST00000460616 DBNDD1Q9H9R9 158 aa16.64■□□□□ 0.26
SSR4-206ENST00000460616 CD209Q9NNX6 404 aa16.64■□□□□ 0.26
SSR4-206ENST00000460616 PCYOX1Q9UHG3 505 aa16.64■□□□□ 0.26
SSR4-206ENST00000460616 ZMYND8Q9ULU4 1186 aaPredicted RBP16.64■□□□□ 0.26
SSR4-206ENST00000460616 ZNF646O15015 1829 aaPredicted RBP16.64■□□□□ 0.25
SSR4-206ENST00000460616 GNAT1P11488 350 aa16.64■□□□□ 0.25
SSR4-206ENST00000460616 RAD23BP54727 409 aa16.64■□□□□ 0.25
SSR4-206ENST00000460616 MGAT5Q09328 741 aa16.64■□□□□ 0.25
SSR4-206ENST00000460616 ZNF804AQ7Z570 1209 aa16.64■□□□□ 0.25
SSR4-206ENST00000460616 SLC44A5Q8NCS7 719 aa16.64■□□□□ 0.25
SSR4-206ENST00000460616 PIGOQ8TEQ8 1089 aa16.64■□□□□ 0.25
SSR4-206ENST00000460616 TGS1Q96RS0 853 aaKnown RBP16.64■□□□□ 0.25
SSR4-206ENST00000460616 RTFDC1Q9BY42 306 aaPredicted RBP16.64■□□□□ 0.25
SSR4-206ENST00000460616 ZNF277Q9NRM2 450 aaPredicted RBP16.64■□□□□ 0.25
SSR4-206ENST00000460616 TXLNGQ9NUQ3 528 aa16.64■□□□□ 0.25
SSR4-206ENST00000460616 GCNT4Q9P109 453 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms