RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 LINC00116Q8NCU8 138 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 CHMP6Q96FZ7 201 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 JPH1Q9HDC5 661 aaPredicted RBP12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 AMACRQ9UHK6 382 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 TUBE1Q9UJT0 475 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 CHD1O14646 1710 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 CHRNA3P32297 505 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 BCAR1P56945 870 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 IL1RL1Q01638 556 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 CCDC137Q6PK04 289 aaKnown RBP12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 RHOT1Q8IXI2 618 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 C1orf54Q8WWF1 131 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 TUFT1Q9NNX1 390 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 EPS15L1Q9UBC2 864 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 MID2Q9UJV3 735 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 PRR12Q9ULL5 1215 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 GPS1Q13098 491 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 WDR72Q3MJ13 1102 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 ATG16L1Q676U5 607 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 ENOSF1Q7L5Y1 443 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 TAF1DQ9H5J8 278 aaPredicted RBP12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 SLITRK6Q9H5Y7 841 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 MRFAP1Q9Y605 127 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 PI4K2BG5E9Z4 385 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 MAPK13O15264 365 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 CREB3O43889 395 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 KRT7P08729 469 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 SCP2P22307 547 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 PMS2P54278 862 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 COG7P83436 770 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 FAM102AQ5T9C2 384 aaPredicted RBP12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 PPM1NQ8N819 430 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 PARD3BQ8TEW8 1205 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 C7orf25Q9BPX7 421 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 REEP2Q9BRK0 252 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 NOC2LQ9Y3T9 749 aaKnown RBP12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 TEX13BQ9BXU2 312 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 CNOT7Q9UIV1 285 aaKnown RBP12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 A8MXQ7 604 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 SRGNP10124 158 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 TXNP10599 105 aaKnown RBP12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 GUCY2CP25092 1073 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 OCRLQ01968 901 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 TRIM67Q6ZTA4 783 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 C16orf86Q6ZW13 317 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 WDR75Q8IWA0 830 aaKnown RBP12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 THEM5Q8N1Q8 247 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 EXT2Q93063 718 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 MMP19Q99542 508 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 AGPAT1Q99943 283 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 SCAF8Q9UPN6 1271 aaKnown RBP12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 FRMD3A2A2Y4 597 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 STXBP3O00186 592 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 NR3C2P08235 984 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 BRAFP15056 766 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 ACOT2P49753 483 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 GRIN1Q05586 938 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 ART3Q13508 389 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 HHIPL2Q6UWX4 724 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 RNPC3Q96LT9 517 aaKnown RBP12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 FGD4Q96M96 766 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 PPARGC1AQ9UBK2 798 aaKnown RBP12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 IP6K2Q9UHH9 426 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 STAP1Q9ULZ2 295 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 POLIQ9UNA4 740 aa12.49□□□□□ -0.41
SMARCAD1-204ENST00000457823 CIITAP33076 1130 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 SLC10A5Q5PT55 438 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 CRLF3Q8IUI8 442 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 MICALL2Q8IY33 904 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 TMEM143Q96AN5 459 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 TUBB6Q9BUF5 446 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 TRIM55Q9BYV6 548 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 WNT8AQ9H1J5 351 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 KCNF1Q9H3M0 494 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 ACTR5Q9H9F9 607 aaPredicted RBP12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 ABCF3Q9NUQ8 709 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 INTUQ9ULD6 942 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 PPP1R9AQ9ULJ8 1098 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 PTPRUQ92729 1446 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 F5H423 210 aaPredicted RBP12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 ENTPD3O75355 529 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 DGAT1O75907 488 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 PEX19P40855 299 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 VSNL1P62760 191 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 CCZ1BP86790 482 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 CCZ1P86791 482 aaPredicted RBP12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 CAV1Q03135 178 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 NR1I3Q14994 352 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 SLC18A3Q16572 532 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 TAF1BQ53T94 588 aaPredicted RBP12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 XKR3Q5GH77 459 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 VPS11Q9H270 941 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 DONSONQ9NYP3 566 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 SNX12Q9UMY4 172 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 MADDQ8WXG6 1647 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 HSPA4LO95757 839 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 UCHL3P15374 230 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 TROAPQ12815 778 aa12.48□□□□□ -0.41
SMARCAD1-204ENST00000457823 KLC3Q6P597 504 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms