RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 PRKCBP05771 671 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 ITGA4P13612 1032 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 SLC12A3P55017 1021 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 AMPD3Q01432 767 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 STRN3Q13033 797 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 PRPF4BQ13523 1007 aaKnown RBP13.57□□□□□ -0.24
C9orf139-201ENST00000457302 MCM6Q14566 821 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 MYCT1Q8N699 235 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 CPB2Q96IY4 423 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 SPATA32Q96LK8 384 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 GUCD1Q96NT3 240 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 PYM1Q9BRP8 204 aaKnown RBP13.57□□□□□ -0.24
C9orf139-201ENST00000457302 RUSC1Q9BVN2 902 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 MRPL9Q9BYD2 267 aaKnown RBP13.57□□□□□ -0.24
C9orf139-201ENST00000457302 FZD8Q9H461 694 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 RCOR1Q9UKL0 485 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 ODF2LQ9ULJ1 636 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 PCDHB2Q9Y5E7 798 aa13.57□□□□□ -0.24
C9orf139-201ENST00000457302 LAMA2P24043 3122 aaKnown RBP13.57□□□□□ -0.24
C9orf139-201ENST00000457302 TCHHQ07283 1943 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 CARNS1A5YM72 827 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 RBAK-RBAKDNI3L0D1 243 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 N4BP3O15049 544 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 TSPAN1O60635 241 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 FGFR1P11362 822 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 PLS3P13797 630 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 ABCD1P33897 745 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 CTNNB1P35222 781 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 BMPR1AP36894 532 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 NPTX2P47972 431 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 RNASELQ05823 741 aaKnown RBP13.56□□□□□ -0.24
C9orf139-201ENST00000457302 GPM6BQ13491 265 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 PTPROQ16827 1216 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 FAM187BQ17R55 369 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 EPC2Q52LR7 807 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 NAALADL2Q58DX5 795 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 CDCA2Q69YH5 1023 aaPredicted RBP13.56□□□□□ -0.24
C9orf139-201ENST00000457302 SLC27A1Q6PCB7 646 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 GLB1LQ6UWU2 654 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 USP49Q70CQ1 688 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 CRIPAKQ8N1N5 446 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 PDILTQ8N807 584 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 IQUBQ8NA54 791 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 URGCPQ8TCY9 931 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 FAM193BQ96PV7 902 aaPredicted RBP13.56□□□□□ -0.24
C9orf139-201ENST00000457302 NTPCRQ9BSD7 190 aaKnown RBP13.56□□□□□ -0.24
C9orf139-201ENST00000457302 C17orf80Q9BSJ5 609 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 SCAND2PQ9GZW5 306 aaPredicted RBP13.56□□□□□ -0.24
C9orf139-201ENST00000457302 TMEM134Q9H6X4 195 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 LMCD1Q9NZU5 365 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 KANSL3Q9P2N6 904 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 FNDC1Q4ZHG4 1894 aaPredicted RBP13.56□□□□□ -0.24
C9orf139-201ENST00000457302 NLRC5Q86WI3 1866 aa13.56□□□□□ -0.24
C9orf139-201ENST00000457302 SZT2Q5T011 3432 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 A0A1B0GUA9 196 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 RFXAPO00287 272 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 ARF4P18085 180 aaPredicted RBP13.55□□□□□ -0.24
C9orf139-201ENST00000457302 SCP2P22307 547 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 HOXA11P31270 313 aaPredicted RBP13.55□□□□□ -0.24
C9orf139-201ENST00000457302 CSPP1Q1MSJ5 1256 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 LONRF3Q496Y0 759 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 MRPL10Q7Z7H8 261 aaKnown RBP13.55□□□□□ -0.24
C9orf139-201ENST00000457302 SLC17A8Q8NDX2 589 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 HELQQ8TDG4 1101 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 SPIRE2Q8WWL2 714 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 BSNDQ8WZ55 320 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 TCHPQ9BT92 498 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 C11orf84Q9BUA3 381 aaPredicted RBP13.55□□□□□ -0.24
C9orf139-201ENST00000457302 CUEDC2Q9H467 287 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 PARVGQ9HBI0 331 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 BLOC1S4Q9NUP1 217 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 TYW1Q9NV66 732 aaKnown RBP13.55□□□□□ -0.24
C9orf139-201ENST00000457302 PCDHA7Q9UN72 937 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 CNTNAP2Q9UHC6 1331 aa13.55□□□□□ -0.24
C9orf139-201ENST00000457302 NPHP3-ACAD11A0A0J9YXS1 232 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 GOLGA6L4A6NEF3 574 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 H3BNC9 293 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 NPTXRO95502 500 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 LAG3P18627 525 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 ALDH7A1P49419 539 aaKnown RBP13.54□□□□□ -0.24
C9orf139-201ENST00000457302 GIT2Q14161 759 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 ARSHQ5FYA8 562 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 ZNF598Q86UK7 904 aaKnown RBP13.54□□□□□ -0.24
C9orf139-201ENST00000457302 LRRC43Q8N309 656 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 PPM1EQ8WY54 764 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 CLP1Q92989 425 aaKnown RBP13.54□□□□□ -0.24
C9orf139-201ENST00000457302 LPPQ93052 612 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 CASD1Q96PB1 797 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 REEP2Q9BRK0 252 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 MRPL4Q9BYD3 311 aaKnown RBP13.54□□□□□ -0.24
C9orf139-201ENST00000457302 RSAD1Q9HA92 442 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 PARP2Q9UGN5 583 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 PUF60Q9UHX1 559 aaKnown RBP13.54□□□□□ -0.24
C9orf139-201ENST00000457302 INPP5FQ9Y2H2 1132 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 ZDHHC9Q9Y397 364 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 MRPL42Q9Y6G3 142 aaKnown RBP13.54□□□□□ -0.24
C9orf139-201ENST00000457302 RALGAPA2Q2PPJ7 1873 aa13.54□□□□□ -0.24
C9orf139-201ENST00000457302 SLC16A4O15374 487 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms