RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 VCAM1P19320 739 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 CCNFP41002 786 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 CDK7P50613 346 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 USP14P54578 494 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 GSTO1P78417 241 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 CLCQ05315 142 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 MRPL58Q14197 206 aaKnown RBP4.51□□□□□ -1.69
RBM39-220ENST00000455343 SLC14A2Q15849 920 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 PRAMEF19Q5SWL8 479 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 ADGRF1Q5T601 910 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 CCSAPQ6IQ19 270 aaPredicted RBP4.51□□□□□ -1.69
RBM39-220ENST00000455343 MFSD5Q6N075 450 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 ZPBP2Q6X784 338 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 CEP128Q6ZU80 1094 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 HS2ST1Q7LGA3 356 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 NLRC3Q7RTR2 1065 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 DPP9Q86TI2 863 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 SIRT2Q8IXJ6 389 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 TEX11Q8IYF3 940 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 REXO1Q8N1G1 1221 aaKnown RBP4.51□□□□□ -1.69
RBM39-220ENST00000455343 SLC44A5Q8NCS7 719 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 SHCBP1Q8NEM2 672 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 SH3RF3Q8TEJ3 882 aaPredicted RBP4.51□□□□□ -1.69
RBM39-220ENST00000455343 PPM1EQ8WY54 764 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 MAML3Q96JK9 1138 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 ZNF512BQ96KM6 892 aaPredicted RBP4.51□□□□□ -1.69
RBM39-220ENST00000455343 SGPP1Q9BX95 441 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 MOV10L1Q9BXT6 1211 aaKnown RBP4.51□□□□□ -1.69
RBM39-220ENST00000455343 PRDM14Q9GZV8 571 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 SIL1Q9H173 461 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 CRTAC1Q9NQ79 661 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 UBP1Q9NZI7 540 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 GGT7Q9UJ14 662 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 ROBO3Q96MS0 1386 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 LTBP2Q14767 1821 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 NCANO14594 1321 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 FLT1P17948 1338 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 DOCK1Q14185 1865 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 SSU72P8A0A1W2PR75 194 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 PQBP1O60828 265 aaKnown RBP4.5□□□□□ -1.69
RBM39-220ENST00000455343 CLEC3AO75596 197 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 GH2P01242 217 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 NME1P15531 152 aaKnown RBP4.5□□□□□ -1.69
RBM39-220ENST00000455343 GUCY1A2P33402 732 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 MCAMP43121 646 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 KCNQ1P51787 676 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 TFF2Q03403 129 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 COG2Q14746 738 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 MVPQ14764 893 aaKnown RBP4.5□□□□□ -1.69
RBM39-220ENST00000455343 AAK1Q2M2I8 961 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 SEZ6Q53EL9 994 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 TMEM31Q5JXX7 168 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 WDR78Q5VTH9 848 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 GK5Q6ZS86 529 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 ADGRA1Q86SQ6 560 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 RNF180Q86T96 592 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 SPATA5Q8NB90 893 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 KLHDC9Q8NEP7 349 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 ACER1Q8TDN7 264 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 TGFBRAP1Q8WUH2 860 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 HERVK_113Q902F9 699 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 SNX27Q96L92 541 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 FCRL2Q96LA5 508 aaPredicted RBP4.5□□□□□ -1.69
RBM39-220ENST00000455343 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 SPATC1LQ9H0A9 340 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 GZF1Q9H116 711 aaPredicted RBP4.5□□□□□ -1.69
RBM39-220ENST00000455343 XPNPEP3Q9NQH7 507 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 AATFQ9NY61 560 aaKnown RBP eCLIP4.5□□□□□ -1.69
RBM39-220ENST00000455343 HOXC10Q9NYD6 342 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 MBD1Q9UIS9 605 aaPredicted RBP4.5□□□□□ -1.69
RBM39-220ENST00000455343 PALD1Q9ULE6 856 aa4.5□□□□□ -1.69
RBM39-220ENST00000455343 CNOT6Q9ULM6 557 aaKnown RBP4.5□□□□□ -1.69
RBM39-220ENST00000455343 PA2G4Q9UQ80 394 aaKnown RBP4.5□□□□□ -1.69
RBM39-220ENST00000455343 DIS3Q9Y2L1 958 aaKnown RBP4.5□□□□□ -1.69
RBM39-220ENST00000455343 ELP1O95163 1332 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 ZNF521Q96K83 1311 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 WDFY4Q6ZS81 3184 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 A0A1W2PRG0 241 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 PI4K2BG5E9Z4 385 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 RFXAPO00287 272 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 TNFRSF10CO14798 259 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 BAG3O95817 575 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 PGK1P00558 417 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 RARBP10826 455 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 CSF2RAP15509 400 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 HOXA5P20719 270 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 CST5P28325 142 aaPredicted RBP4.49□□□□□ -1.69
RBM39-220ENST00000455343 ZNF165P49910 485 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 ACLYP53396 1101 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 SRSF3P84103 164 aaKnown RBP4.49□□□□□ -1.69
RBM39-220ENST00000455343 APOBRQ0VD83 1088 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 PPIGQ13427 754 aaKnown RBP eCLIP4.49□□□□□ -1.692e-19■□□□□ 10.5
RBM39-220ENST00000455343 MTX1Q13505 466 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 SSPNQ14714 243 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 RAB30Q15771 203 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 ZYXQ15942 572 aaKnown RBP4.49□□□□□ -1.69
RBM39-220ENST00000455343 ZNF385BQ569K4 471 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 PSRC1Q6PGN9 363 aaPredicted RBP4.49□□□□□ -1.69
RBM39-220ENST00000455343 CCDC174Q6PII3 467 aa4.49□□□□□ -1.69
RBM39-220ENST00000455343 ATF7IPQ6VMQ6 1270 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms