RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 CFAP45Q9UL16 551 aa17.12■□□□□ 0.33
VPS8-213ENST00000453056 CCDC169A6NNP5 214 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 C5orf67F2Z3F1 127 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 PPP6R2O75170 966 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 KRT18P05783 430 aaKnown RBP17.11■□□□□ 0.33
VPS8-213ENST00000453056 ATF7P17544 494 aaPredicted RBP17.11■□□□□ 0.33
VPS8-213ENST00000453056 LAG3P18627 525 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 BMPR1AP36894 532 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 PEX3P56589 373 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 GPM6BQ13491 265 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 PKP1Q13835 747 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 AMHR2Q16671 573 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 CSPP1Q1MSJ5 1256 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 FOXD4L6Q3SYB3 417 aaPredicted RBP17.11■□□□□ 0.33
VPS8-213ENST00000453056 FOXD4L3Q6VB84 417 aaPredicted RBP17.11■□□□□ 0.33
VPS8-213ENST00000453056 CCDC73Q6ZRK6 1079 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 LARP4BQ92615 738 aaKnown RBP17.11■□□□□ 0.33
VPS8-213ENST00000453056 CPB2Q96IY4 423 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 EPSTI1Q96J88 318 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 CLIC6Q96NY7 704 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 LMCD1Q9NZU5 365 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 TFIP11Q9UBB9 837 aaKnown RBP17.11■□□□□ 0.33
VPS8-213ENST00000453056 DAXXQ9UER7 740 aaPredicted RBP17.11■□□□□ 0.33
VPS8-213ENST00000453056 PCDHB12Q9Y5F1 795 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 ATP6V1DQ9Y5K8 247 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 CNTNAP2Q9UHC6 1331 aa17.11■□□□□ 0.33
VPS8-213ENST00000453056 H3BNC9 293 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 N4BP3O15049 544 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 ARF4P18085 180 aaPredicted RBP17.1■□□□□ 0.33
VPS8-213ENST00000453056 LIG1P18858 919 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 POU3F3P20264 500 aaPredicted RBP17.1■□□□□ 0.33
VPS8-213ENST00000453056 SMTNP53814 917 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 PRPF4BQ13523 1007 aaKnown RBP17.1■□□□□ 0.33
VPS8-213ENST00000453056 NAALADL2Q58DX5 795 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 CLLU1OSQ5K130 101 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 SPECC1Q5M775 1068 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 RRAGBQ5VZM2 374 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 APBB1IPQ7Z5R6 666 aaPredicted RBP17.1■□□□□ 0.33
VPS8-213ENST00000453056 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 HELQQ8TDG4 1101 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 KIFC3Q9BVG8 833 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 FZD8Q9H461 694 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 KMT5AQ9NQR1 393 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 RNF19AQ9NV58 838 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 RBM19Q9Y4C8 960 aaKnown RBP17.1■□□□□ 0.33
VPS8-213ENST00000453056 MTCH2Q9Y6C9 303 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 PRUNE2Q8WUY3 3088 aa17.1■□□□□ 0.33
VPS8-213ENST00000453056 TCHHQ07283 1943 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 CARNS1A5YM72 827 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 H0YCG3 227 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 ACKR2O00590 384 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 B4GALT5O43286 388 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 LPXNO60711 386 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 TBCAO75347 108 aaKnown RBP17.09■□□□□ 0.33
VPS8-213ENST00000453056 BRD1O95696 1058 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 LINC00271P0C7V0 271 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 NPTX2P47972 431 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 RAD51AP2Q09MP3 1159 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 MAPK7Q13164 816 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 DHX8Q14562 1220 aaKnown RBP17.09■□□□□ 0.33
VPS8-213ENST00000453056 MCM6Q14566 821 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 TIGD5Q53EQ6 642 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 UBXN11Q5T124 520 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 SLC27A1Q6PCB7 646 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 DAW1Q8N136 415 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 LPPQ93052 612 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 P2RX5Q93086 422 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 MRPL38Q96DV4 380 aaKnown RBP17.09■□□□□ 0.33
VPS8-213ENST00000453056 CASD1Q96PB1 797 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 ADPGKQ9BRR6 497 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 CCDC113Q9H0I3 377 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 LMAN2LQ9H0V9 348 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 UBN1Q9NPG3 1134 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 BLOC1S4Q9NUP1 217 aa17.09■□□□□ 0.33
VPS8-213ENST00000453056 K7ERI5 159 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 CUTAO60888 179 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 FAM13AO94988 1023 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 ITGA4P13612 1032 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 PLS3P13797 630 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 NCLP19338 710 aaKnown RBP17.08■□□□□ 0.32
VPS8-213ENST00000453056 PPM1AP35813 382 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 STAT6P42226 847 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 NOMO2Q5JPE7 1267 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 USP49Q70CQ1 688 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 MRPL10Q7Z7H8 261 aaKnown RBP17.08■□□□□ 0.32
VPS8-213ENST00000453056 SPIRE2Q8WWL2 714 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 RSAD1Q9HA92 442 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 POLD4Q9HCU8 107 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 TYW1Q9NV66 732 aaKnown RBP17.08■□□□□ 0.32
VPS8-213ENST00000453056 LARSQ9P2J5 1176 aaKnown RBP17.08■□□□□ 0.32
VPS8-213ENST00000453056 ARHGAP28Q9P2N2 729 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 INPP5FQ9Y2H2 1132 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 IPPQ9Y573 584 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 TDRD15B5MCY1 1934 aaKnown RBP17.08■□□□□ 0.32
VPS8-213ENST00000453056 EYSQ5T1H1 3165 aa17.08■□□□□ 0.32
VPS8-213ENST00000453056 ZMYM2Q9UBW7 1377 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 A0A1B0GUA9 196 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 NPTXRO95502 500 aa17.07■□□□□ 0.32
VPS8-213ENST00000453056 SCP2P22307 547 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms