RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 ADH1AP07327 375 aa20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 OR1G1P47890 313 aa20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 CCT2P78371 535 aaKnown RBP20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 SPECC1Q5M775 1068 aa20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 BLOC1S2Q6QNY1 142 aa20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 RIN2Q8WYP3 895 aaPredicted RBP20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 STAMQ92783 540 aa20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 CEP89Q96ST8 783 aa20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 HINFPQ9BQA5 517 aa20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 TMEM175Q9BSA9 504 aa20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 RNF26Q9BY78 433 aaPredicted RBP20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 PIDD1Q9HB75 910 aa20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 AGPAT5Q9NUQ2 364 aa20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 SSX2IPQ9Y2D8 614 aa20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 COL4A3BPQ9Y5P4 624 aa20.19■□□□□ 0.82
CHCHD3-203ENST00000448878 DENND4AQ7Z401 1863 aa20.18■□□□□ 0.82
CHCHD3-203ENST00000448878 INPPL1O15357 1258 aa20.18■□□□□ 0.82
CHCHD3-203ENST00000448878 STBD1O95210 358 aa20.18■□□□□ 0.82
CHCHD3-203ENST00000448878 PSMC5P62195 406 aa20.18■□□□□ 0.82
CHCHD3-203ENST00000448878 Q4G0T1 1027 aa20.18■□□□□ 0.82
CHCHD3-203ENST00000448878 SLC7A3Q8WY07 619 aa20.18■□□□□ 0.82
CHCHD3-203ENST00000448878 C22orf23Q9BZE7 217 aa20.18■□□□□ 0.82
CHCHD3-203ENST00000448878 BMP2KQ9NSY1 1161 aaPredicted RBP20.18■□□□□ 0.82
CHCHD3-203ENST00000448878 WNT16Q9UBV4 365 aa20.18■□□□□ 0.82
CHCHD3-203ENST00000448878 DPP7Q9UHL4 492 aa20.18■□□□□ 0.82
CHCHD3-203ENST00000448878 LILRB3O75022 631 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 GLUD1P00367 558 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 LMNAP02545 664 aaKnown RBP20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 SOD2P04179 222 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 SPATA31D3P0C874 917 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 NPEPPSP55786 919 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 BMP2KLQ5H9B9 411 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 SPATA31D4Q6ZUB0 917 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 ANO5Q75V66 913 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 TAS1R1Q7RTX1 841 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 SKAP1Q86WV1 359 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 SMG7Q92540 1137 aaKnown RBP20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 TMEM143Q96AN5 459 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 CEP170P1Q96L14 293 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 RPS6KC1Q96S38 1066 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 IFT122Q9HBG6 1241 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 NCOA5Q9HCD5 579 aaKnown RBP20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 R4GN57 208 aa20.17■□□□□ 0.82
CHCHD3-203ENST00000448878 C2orf16Q68DN1 1984 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 KRBA1A5PL33 1030 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 TEX28O15482 410 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 N4BP1O75113 896 aaKnown RBP20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 RFPL2O75678 378 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 ITGA4P13612 1032 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 MRPL10Q7Z7H8 261 aaKnown RBP20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 PALB2Q86YC2 1186 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 GLYCTKQ8IVS8 523 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 KIAA2013Q8IYS2 634 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 SLC44A3Q8N4M1 653 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 PRPF31Q8WWY3 499 aaKnown RBP20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 WDR6Q9NNW5 1121 aaKnown RBP20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 SH3GLB2Q9NR46 395 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 PCDHA4Q9UN74 947 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 CLUHO75153 1309 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 CNTNAP2Q9UHC6 1331 aa20.16■□□□□ 0.82
CHCHD3-203ENST00000448878 IFNAR1P17181 557 aa20.15■□□□□ 0.82
CHCHD3-203ENST00000448878 GLUD2P49448 558 aa20.15■□□□□ 0.82
CHCHD3-203ENST00000448878 NTRK3Q16288 839 aa20.15■□□□□ 0.82
CHCHD3-203ENST00000448878 SRGAP1Q7Z6B7 1085 aa20.15■□□□□ 0.82
CHCHD3-203ENST00000448878 TRIM22Q8IYM9 498 aa20.15■□□□□ 0.82
CHCHD3-203ENST00000448878 CMASQ8NFW8 434 aaPredicted RBP20.15■□□□□ 0.82
CHCHD3-203ENST00000448878 PSPC1Q8WXF1 523 aaKnown RBP20.15■□□□□ 0.82
CHCHD3-203ENST00000448878 MYADMQ96S97 322 aa20.15■□□□□ 0.82
CHCHD3-203ENST00000448878 HERC2P3Q9BVR0 1158 aa20.15■□□□□ 0.82
CHCHD3-203ENST00000448878 TBC1D17Q9HA65 648 aa20.15■□□□□ 0.82
CHCHD3-203ENST00000448878 DDX25Q9UHL0 483 aaKnown RBP20.15■□□□□ 0.82
CHCHD3-203ENST00000448878 VPS13AQ96RL7 3174 aa20.15■□□□□ 0.82
CHCHD3-203ENST00000448878 DKC1O60832 514 aaKnown RBP eCLIP20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 NR1I2O75469 434 aa20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 ERLIN2O94905 339 aa20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 DCNP07585 359 aaKnown RBP20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 QARSP47897 775 aaKnown RBP20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 SSRP1Q08945 709 aaKnown RBP20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 EXOC8Q8IYI6 725 aa20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 BLIDQ8IZY5 108 aa20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 ZNF579Q8NAF0 562 aaKnown RBP20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 ST13P5Q8NFI4 369 aaPredicted RBP20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 GPR152Q8TDT2 470 aa20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 APOL6Q9BWW8 343 aa20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 SEMA4AQ9H3S1 761 aa20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 MINDY3Q9H8M7 445 aa20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 UBN1Q9NPG3 1134 aa20.14■□□□□ 0.81
CHCHD3-203ENST00000448878 CYP3A7-CYP3A51PA0A087WV96 503 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 GAS2O43903 313 aaKnown RBP20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 MARCH6O60337 910 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 CDC45O75419 566 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 SRFP11831 508 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 NCLP19338 710 aaKnown RBP20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 CYP3A7P24462 503 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 NCBP1Q09161 790 aaKnown RBP20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 LAMTOR4Q0VGL1 99 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 UBXN11Q5T124 520 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 B3GNT9Q6UX72 402 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 CYP26C1Q6V0L0 522 aa20.13■□□□□ 0.81
CHCHD3-203ENST00000448878 GET4Q7L5D6 327 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms