RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 FGF18O76093 207 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 TOP3BO95985 862 aaKnown RBP3.89□□□□□ -1.79
PMS1-215ENST00000447232 CDK8P49336 464 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 EXOSC9Q06265 439 aaKnown RBP3.89□□□□□ -1.79
PMS1-215ENST00000447232 C19orf57Q0VDD7 668 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 DGKDQ16760 1214 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 PRSS36Q5K4E3 855 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 ATAT1Q5SQI0 421 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 GORABQ5T7V8 394 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 OTOP3Q7RTS5 596 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 PROSER1Q86XN7 944 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 RPAP2Q8IXW5 612 aaPredicted RBP3.89□□□□□ -1.79
PMS1-215ENST00000447232 FEZF2Q8TBJ5 459 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 LINC01599Q8WXQ3 324 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 ZNF512BQ96KM6 892 aaPredicted RBP3.89□□□□□ -1.79
PMS1-215ENST00000447232 GPR20Q99678 358 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 ALG1Q9BT22 464 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 DDX23Q9BUQ8 820 aaKnown RBP3.89□□□□□ -1.79
PMS1-215ENST00000447232 EHMT1Q9H9B1 1298 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 NYAP2Q9P242 653 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 LZTS1Q9Y250 596 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 TEX15Q9BXT5 2789 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 PIEZO2Q9H5I5 2752 aa3.89□□□□□ -1.79
PMS1-215ENST00000447232 MYH4Q9Y623 1939 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 FNDC1Q4ZHG4 1894 aaPredicted RBP3.88□□□□□ -1.79
PMS1-215ENST00000447232 EIF4E1BA6NMX2 242 aaKnown RBP3.88□□□□□ -1.79
PMS1-215ENST00000447232 KRT38O76015 456 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 CTSHP09668 335 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 RARAP10276 462 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 ALAS1P13196 640 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 ZAP70P43403 619 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 SRSF1Q07955 248 aaKnown RBP eCLIP3.88□□□□□ -1.79
PMS1-215ENST00000447232 LPAL2Q16609 132 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 COL28A1Q2UY09 1125 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 COX20Q5RI15 118 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 PLPP4Q5VZY2 271 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 C19orf48Q6RUI8 117 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 RUFY4Q6ZNE9 571 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 C16orf86Q6ZW13 317 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 SLC44A3Q8N4M1 653 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 CELF5Q8N6W0 485 aaKnown RBP3.88□□□□□ -1.79
PMS1-215ENST00000447232 GPR152Q8TDT2 470 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 TTC9Q92623 222 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 SCNM1Q9BWG6 230 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 BCO2Q9BYV7 579 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 NGRNQ9NPE2 291 aaKnown RBP3.88□□□□□ -1.79
PMS1-215ENST00000447232 C2orf16Q68DN1 1984 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 N4BP1O75113 896 aaKnown RBP3.88□□□□□ -1.79
PMS1-215ENST00000447232 GH1P01241 217 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 H2AFB1P0C5Y9 115 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 H2AFB2P0C5Z0 115 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 ZNF286BP0CG31 522 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 MAGEA9P43362 315 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 GPLD1P80108 840 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 PLCB3Q01970 1234 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 APOBRQ0VD83 1088 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 BAATQ14032 418 aaPredicted RBP3.88□□□□□ -1.79
PMS1-215ENST00000447232 RARS2Q5T160 578 aaKnown RBP3.88□□□□□ -1.79
PMS1-215ENST00000447232 ELMSAN1Q6PJG2 1045 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 DCLRE1AQ6PJP8 1040 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 TSSK4Q6SA08 328 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 NSMFQ6X4W1 530 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 DHX37Q8IY37 1157 aaKnown RBP3.88□□□□□ -1.79
PMS1-215ENST00000447232 TMEFF1Q8IYR6 380 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 C12orf76Q8N812 135 aaPredicted RBP3.88□□□□□ -1.79
PMS1-215ENST00000447232 RSAD2Q8WXG1 361 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 TCF25Q9BQ70 676 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 SSBP4Q9BWG4 385 aaPredicted RBP3.88□□□□□ -1.79
PMS1-215ENST00000447232 OSBPL6Q9BZF3 934 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.88□□□□□ -1.791e-16■■■■■ 250
PMS1-215ENST00000447232 SLC2A4RGQ9NR83 387 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 RAB23Q9ULC3 237 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 NOVA2Q9UNW9 492 aaKnown RBP3.88□□□□□ -1.79
PMS1-215ENST00000447232 PCDHB12Q9Y5F1 795 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 RAI2Q9Y5P3 530 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 BAZ2AQ9UIF9 1905 aaKnown RBP3.88□□□□□ -1.79
PMS1-215ENST00000447232 DOCK8Q8NF50 2099 aa3.88□□□□□ -1.79
PMS1-215ENST00000447232 KIAA1217Q5T5P2 1943 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 ASXL3Q9C0F0 2248 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 TREHO43280 583 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 OCLNQ16625 522 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 PAN2Q504Q3 1202 aaKnown RBP3.87□□□□□ -1.79
PMS1-215ENST00000447232 STPG1Q5TH74 334 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 C12orf60Q5U649 245 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 CCDC149Q6ZUS6 474 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 TREML1Q86YW5 311 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 NPAS4Q8IUM7 802 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 RGL4Q8IZJ4 473 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 DTWD1Q8N5C7 304 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 SDR42E1Q8WUS8 393 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 MRPS27Q92552 414 aaKnown RBP3.87□□□□□ -1.79
PMS1-215ENST00000447232 ATP6V0A1Q93050 837 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 MKL1Q969V6 931 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 NXPE3Q969Y0 559 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 PRIMPOLQ96LW4 560 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 DZANK1Q9NVP4 752 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 TMEM260Q9NX78 707 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 TLR7Q9NYK1 1049 aaKnown RBP3.87□□□□□ -1.79
PMS1-215ENST00000447232 SYNPO2Q9UMS6 1093 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 MTF2Q9Y483 593 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms