RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 HNRNPDLO14979 420 aaKnown RBP18.96■□□□□ 0.63
SMC6-206ENST00000446852 P4HA2O15460 535 aa18.96■□□□□ 0.63
SMC6-206ENST00000446852 NCK2O43639 380 aa18.96■□□□□ 0.63
SMC6-206ENST00000446852 N4BP1O75113 896 aaKnown RBP18.96■□□□□ 0.63
SMC6-206ENST00000446852 OSBPP22059 807 aa18.96■□□□□ 0.63
SMC6-206ENST00000446852 ANXA13P27216 316 aa18.96■□□□□ 0.63
SMC6-206ENST00000446852 NEDD9Q14511 834 aa18.96■□□□□ 0.63
SMC6-206ENST00000446852 ALKBH5Q6P6C2 394 aaKnown RBP18.96■□□□□ 0.63
SMC6-206ENST00000446852 ARHGEF19Q8IW93 802 aa18.96■□□□□ 0.63
SMC6-206ENST00000446852 NIFKQ9BYG3 293 aaKnown RBP18.96■□□□□ 0.63
SMC6-206ENST00000446852 PLXNA1Q9UIW2 1896 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 POTEJP0CG39 1038 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 TGFB3P10600 412 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 NAP1L1P55209 391 aaKnown RBP18.95■□□□□ 0.62
SMC6-206ENST00000446852 ARHGAP44Q17R89 818 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 C10orf76Q5T2E6 689 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 NFRKBQ6P4R8 1299 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 MSANTD4Q8NCY6 345 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 ASAP3Q8TDY4 903 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 POMGNT1Q8WZA1 660 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 FBXL18Q96ME1 805 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 PNKPQ96T60 521 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 TLR10Q9BXR5 811 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 MXI1P50539 228 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 METTL7BQ6UX53 244 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 LNX1Q8TBB1 728 aaPredicted RBP18.95■□□□□ 0.62
SMC6-206ENST00000446852 COG1Q8WTW3 980 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 CCDC127Q96BQ5 260 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 MMP19Q99542 508 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 SYT11Q9BT88 431 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 PORCNQ9H237 461 aa18.95■□□□□ 0.62
SMC6-206ENST00000446852 PALMO75781 387 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 RHOXF2BP0C7M4 288 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 RFX1P22670 979 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 TCF7P36402 384 aaPredicted RBP18.94■□□□□ 0.62
SMC6-206ENST00000446852 KCTD2Q14681 263 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 BMS1Q14692 1282 aaKnown RBP18.94■□□□□ 0.62
SMC6-206ENST00000446852 BRDTQ58F21 947 aaPredicted RBP18.94■□□□□ 0.62
SMC6-206ENST00000446852 CREG2Q8IUH2 290 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 PARD3BQ8TEW8 1205 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 POP1Q99575 1024 aaKnown RBP18.94■□□□□ 0.62
SMC6-206ENST00000446852 RHOXF2Q9BQY4 288 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 USP20Q9Y2K6 914 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 DAAM1Q9Y4D1 1078 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 PCDHGC5Q9Y5F6 944 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 LRRIQ3A6PVS8 624 aaPredicted RBP18.94■□□□□ 0.62
SMC6-206ENST00000446852 FOXN3O00409 490 aaPredicted RBP18.94■□□□□ 0.62
SMC6-206ENST00000446852 SEC31AO94979 1220 aaKnown RBP18.94■□□□□ 0.62
SMC6-206ENST00000446852 ZRANB2O95218 330 aaKnown RBP eCLIP18.94■□□□□ 0.621e-8■■■■■ 54.5
SMC6-206ENST00000446852 CYP2C8P10632 490 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 GLRA2P23416 452 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 COPB2P35606 906 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 TUBB4BP68371 445 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 CETN1Q12798 172 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 SNAPC2Q13487 334 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 TARBP2Q15633 366 aaKnown RBP18.94■□□□□ 0.62
SMC6-206ENST00000446852 VPS36Q86VN1 386 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 SLC30A5Q8TAD4 765 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 OSBPL9Q96SU4 736 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 PSMB7Q99436 277 aa18.94■□□□□ 0.62
SMC6-206ENST00000446852 UBE2TQ9NPD8 197 aaPredicted RBP18.94■□□□□ 0.62
SMC6-206ENST00000446852 PLXNB2O15031 1838 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 BTNL10A8MVZ5 291 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 PMM2O15305 246 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 PRLRP16471 622 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 STAT5BP51692 787 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 ERVK-9P63128 1117 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 MAP2K1Q02750 393 aaPredicted RBP18.93■□□□□ 0.62
SMC6-206ENST00000446852 CKAP4Q07065 602 aaKnown RBP18.93■□□□□ 0.62
SMC6-206ENST00000446852 WDR78Q5VTH9 848 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 TMCO3Q6UWJ1 677 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 AFAP1L1Q8TED9 768 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 SLC7A3Q8WY07 619 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 BICD1Q96G01 975 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 MFSD14AQ96MC6 490 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 TOPORSQ9NS56 1045 aaPredicted RBP18.93■□□□□ 0.62
SMC6-206ENST00000446852 ZC3H4Q9UPT8 1303 aaKnown RBP18.93■□□□□ 0.62
SMC6-206ENST00000446852 IQCA1LA6NCM1 817 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 CXCR5P32302 372 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 ARL2P36404 184 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 GLYCTKQ8IVS8 523 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 HYOU1Q9Y4L1 999 aa18.93■□□□□ 0.62
SMC6-206ENST00000446852 GRID2IPA4D2P6 1211 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 GARTP22102 1010 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 CYP24A1Q07973 514 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 GPR162Q16538 588 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 HSDL1Q3SXM5 330 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 CC2D1AQ6P1N0 951 aaPredicted RBP18.92■□□□□ 0.62
SMC6-206ENST00000446852 FBXO16Q8IX29 292 aaPredicted RBP18.92■□□□□ 0.62
SMC6-206ENST00000446852 CAGE1Q8TC20 777 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 U2AF1L4Q8WU68 220 aaKnown RBP18.92■□□□□ 0.62
SMC6-206ENST00000446852 SEPT1Q8WYJ6 367 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 SEMA4DQ92854 862 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 KAT5Q92993 513 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 MROH8Q9H579 483 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 ZNF408Q9H9D4 720 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.92■□□□□ 0.622e-6■■■■■ 33.6
SMC6-206ENST00000446852 H0YCG3 227 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 TULP1O00294 542 aaPredicted RBP18.92■□□□□ 0.62
SMC6-206ENST00000446852 ATP8B3O60423 1300 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms