RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 SLITRK3O94933 977 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 EPCAMP16422 314 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 FERMT3Q86UX7 667 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 SUGP1Q8IWZ8 645 aaKnown RBP17.24■□□□□ 0.35
SEC13-213ENST00000445064 SLFN12Q8IYM2 578 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 FBXL6Q8N531 539 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 RNF149Q8NC42 400 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 URGCPQ8TCY9 931 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 TCP11Q8WWU5 503 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 ASIC4Q96FT7 647 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 VN1R3Q9BXE9 311 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 ZSWIM4Q9H7M6 989 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 RSAD1Q9HA92 442 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 NR2E1Q9Y466 385 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 IRAK3Q9Y616 596 aa17.24■□□□□ 0.35
SEC13-213ENST00000445064 TRIOO75962 3097 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 CARNS1A5YM72 827 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 C2CD4DB7Z1M9 353 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 ASAP2O43150 1006 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 POMCP01189 267 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 ALDH2P05091 517 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 KRT2P35908 639 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 GIT2Q14161 759 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 EMC2Q15006 297 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 ANKRD1Q15327 319 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 PRSS33Q8NF86 280 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 SLC22A17Q8WUG5 538 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 WASF1Q92558 559 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 MTRQ99707 1265 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 EIF2AK1Q9BQI3 630 aaKnown RBP17.23■□□□□ 0.35
SEC13-213ENST00000445064 PCDHA12Q9UN75 941 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 FAN1Q9Y2M0 1017 aa17.23■□□□□ 0.35
SEC13-213ENST00000445064 GAS2O43903 313 aaKnown RBP17.22■□□□□ 0.35
SEC13-213ENST00000445064 LARGE1O95461 756 aa17.22■□□□□ 0.35
SEC13-213ENST00000445064 SSBP05455 408 aaKnown RBP eCLIP17.22■□□□□ 0.35
SEC13-213ENST00000445064 MTHFRP42898 656 aa17.22■□□□□ 0.35
SEC13-213ENST00000445064 ME3Q16798 604 aa17.22■□□□□ 0.35
SEC13-213ENST00000445064 ATAT1Q5SQI0 421 aa17.22■□□□□ 0.35
SEC13-213ENST00000445064 SMG8Q8ND04 991 aaKnown RBP17.22■□□□□ 0.35
SEC13-213ENST00000445064 FEZF2Q8TBJ5 459 aa17.22■□□□□ 0.35
SEC13-213ENST00000445064 TNFRSF25Q93038 417 aa17.22■□□□□ 0.35
SEC13-213ENST00000445064 RIPOR3Q96MK2 946 aa17.22■□□□□ 0.35
SEC13-213ENST00000445064 NECTIN4Q96NY8 510 aa17.22■□□□□ 0.35
SEC13-213ENST00000445064 FAM193BQ96PV7 902 aaPredicted RBP17.22■□□□□ 0.35
SEC13-213ENST00000445064 PHOX2BQ99453 314 aa17.22■□□□□ 0.35
SEC13-213ENST00000445064 XPNPEP1Q9NQW7 623 aa17.22■□□□□ 0.35
SEC13-213ENST00000445064 KANSL3Q9P2N6 904 aa17.22■□□□□ 0.35
SEC13-213ENST00000445064 MUC6Q6W4X9 2439 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 A0A087WWV3 80 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 NRP1O14786 923 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 ERLIN2O94905 339 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 ITGA4P13612 1032 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 NCLP19338 710 aaKnown RBP17.21■□□□□ 0.35
SEC13-213ENST00000445064 FOSBP53539 338 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 ANAPC15P60006 121 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 PTPN14Q15678 1187 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 KREMEN2Q8NCW0 462 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 CPB2Q96IY4 423 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 KLHL5Q96PQ7 755 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 HSD17B14Q9BPX1 270 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 EIF2AQ9BY44 585 aaKnown RBP17.21■□□□□ 0.35
SEC13-213ENST00000445064 BRMS1Q9HCU9 246 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 DZANK1Q9NVP4 752 aa17.21■□□□□ 0.35
SEC13-213ENST00000445064 CNTNAP2Q9UHC6 1331 aa17.21■□□□□ 0.34
SEC13-213ENST00000445064 BTBD18B2RXH4 712 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 WNT7AO00755 349 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 PDGFBP01127 241 aaPredicted RBP17.2■□□□□ 0.34
SEC13-213ENST00000445064 KLRC2P26717 231 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 AVPR2P30518 371 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 TXKP42681 527 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 VCPP55072 806 aaKnown RBP17.2■□□□□ 0.34
SEC13-213ENST00000445064 PTENP60484 403 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 MXD4Q14582 209 aaPredicted RBP17.2■□□□□ 0.34
SEC13-213ENST00000445064 CALCRLQ16602 461 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 TMC5Q6UXY8 1006 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 CABP7Q86V35 215 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 CNNM3Q8NE01 707 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 TMEM175Q9BSA9 504 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 TTC12Q9H892 705 aaPredicted RBP17.2■□□□□ 0.34
SEC13-213ENST00000445064 MIOSQ9NXC5 875 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 DBR1Q9UK59 544 aaKnown RBP17.2■□□□□ 0.34
SEC13-213ENST00000445064 HES2Q9Y543 173 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 IPPQ9Y573 584 aa17.2■□□□□ 0.34
SEC13-213ENST00000445064 INO80B-WBP1J3KQ70 363 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 TSPAN1O60635 241 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 LILRB3O75022 631 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 BRD1O95696 1058 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 NEFLP07196 543 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 CNPP09543 421 aaKnown RBP17.19■□□□□ 0.34
SEC13-213ENST00000445064 KIAA1841Q6NSI8 718 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 TAS1R1Q7RTX1 841 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 PPFIBP1Q86W92 1011 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 NSUN7Q8NE18 718 aaKnown RBP17.19■□□□□ 0.34
SEC13-213ENST00000445064 GTF3C6Q969F1 213 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 EMILIN2Q9BXX0 1053 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 SMOC2Q9H3U7 446 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 UBN1Q9NPG3 1134 aa17.19■□□□□ 0.34
SEC13-213ENST00000445064 ANKEF1Q9NU02 776 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms