RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 DAW1Q8N136 415 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 TOP1MTQ969P6 601 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 PGBD4Q96DM1 585 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 BICD1Q96G01 975 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 MRPL4Q9BYD3 311 aaKnown RBP15.52■□□□□ 0.08
SSBP3-208ENST00000444533 TMX1Q9H3N1 280 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 MINDY3Q9H8M7 445 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 MRPL44Q9H9J2 332 aaKnown RBP15.52■□□□□ 0.08
SSBP3-208ENST00000444533 SERTAD1Q9UHV2 236 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 HPSEQ9Y251 543 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 PCDHA11Q9Y5I1 949 aa15.52■□□□□ 0.08
SSBP3-208ENST00000444533 TET1Q8NFU7 2136 aa15.52■□□□□ 0.07
SSBP3-208ENST00000444533 FAM237AA0A1B0GTK4 181 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.51■□□□□ 0.07
SSBP3-208ENST00000444533 TSPAN1O60635 241 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 ZNF202O95125 648 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 GJB5O95377 273 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 EOMESO95936 686 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 MAPTP10636 758 aaKnown RBP15.51■□□□□ 0.07
SSBP3-208ENST00000444533 ZNF131P52739 623 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 FAM160A1Q05DH4 1040 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 ALCAMQ13740 583 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 RNF169Q8NCN4 708 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 LRRC15Q8TF66 581 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 RSPH1Q8WYR4 309 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 STAMQ92783 540 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 RAD9AQ99638 391 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 KIFC3Q9BVG8 833 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 TRIM9Q9C026 710 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 FZD8Q9H461 694 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 ELAC1Q9H777 363 aaKnown RBP15.51■□□□□ 0.07
SSBP3-208ENST00000444533 TMEM161AQ9NX61 479 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 ARHGAP28Q9P2N2 729 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 SIP14410 1827 aa15.51■□□□□ 0.07
SSBP3-208ENST00000444533 CNTNAP2Q9UHC6 1331 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 A0A0U1RQF3 1178 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 KINO60870 393 aaKnown RBP15.5■□□□□ 0.07
SSBP3-208ENST00000444533 MATR3P43243 847 aaKnown RBP eCLIP15.5■□□□□ 0.07
SSBP3-208ENST00000444533 UBE2HP62256 183 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 DSC3Q14574 896 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 TCTN1Q2MV58 587 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 LONRF3Q496Y0 759 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 SLC27A1Q6PCB7 646 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 HAUS6Q7Z4H7 955 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 TMEM87AQ8NBN3 555 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 CPB2Q96IY4 423 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 C7orf25Q9BPX7 421 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 TCHPQ9BT92 498 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 TRAIPQ9BWF2 469 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 SLC28A3Q9HAS3 691 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 UBN1Q9NPG3 1134 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 FAM105AQ9NUU6 356 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 EXOC7Q9UPT5 735 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 PCDHB13Q9Y5F0 798 aa15.5■□□□□ 0.07
SSBP3-208ENST00000444533 PVALEFA0A1B0GWK0 134 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 C9IYK1 514 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 ACTN4O43707 911 aaKnown RBP15.49■□□□□ 0.07
SSBP3-208ENST00000444533 MGEA5O60502 916 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 GCNT3O95395 438 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 ARF4P18085 180 aaPredicted RBP15.49■□□□□ 0.07
SSBP3-208ENST00000444533 NCKAP1LP55160 1127 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 DCAF4L1Q3SXM0 396 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 ATF7IP2Q5U623 682 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 CNNM4Q6P4Q7 775 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 KRBA2Q6ZNG9 492 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 RTN4RL1Q86UN2 441 aaPredicted RBP15.49■□□□□ 0.07
SSBP3-208ENST00000444533 SFR1Q86XK3 245 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 ECHDC2Q86YB7 292 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 TMEM161BQ8NDZ6 487 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 TIFAQ96CG3 184 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 HVCN1Q96D96 273 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 DNAJC19Q96DA6 116 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 PAGE5Q96GU1 130 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 CCDC113Q9H0I3 377 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 OLFML3Q9NRN5 406 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 EXOC1Q9NV70 894 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 PCDHB2Q9Y5E7 798 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 MICAL3Q7RTP6 2002 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 MYH11P35749 1972 aa15.49■□□□□ 0.07
SSBP3-208ENST00000444533 ADGRA3Q8IWK6 1321 aa15.48■□□□□ 0.07
SSBP3-208ENST00000444533 A0A1B0GUA9 196 aa15.48■□□□□ 0.07
SSBP3-208ENST00000444533 GRXCR1A8MXD5 290 aa15.48■□□□□ 0.07
SSBP3-208ENST00000444533 GTPBP6O43824 516 aaPredicted RBP15.48■□□□□ 0.07
SSBP3-208ENST00000444533 PRPF40AO75400 957 aaKnown RBP15.48■□□□□ 0.07
SSBP3-208ENST00000444533 DNAJB2P25686 324 aa15.48■□□□□ 0.07
SSBP3-208ENST00000444533 HOXA11P31270 313 aaPredicted RBP15.48■□□□□ 0.07
SSBP3-208ENST00000444533 LIG4P49917 911 aa15.48■□□□□ 0.07
SSBP3-208ENST00000444533 RABGGTBP53611 331 aa15.48■□□□□ 0.07
SSBP3-208ENST00000444533 GLB1LQ6UWU2 654 aa15.48■□□□□ 0.07
SSBP3-208ENST00000444533 UNC13DQ70J99 1090 aa15.48■□□□□ 0.07
SSBP3-208ENST00000444533 LINC01599Q8WXQ3 324 aa15.48■□□□□ 0.07
SSBP3-208ENST00000444533 PBX4Q9BYU1 374 aa15.48■□□□□ 0.07
SSBP3-208ENST00000444533 BLZF1Q9H2G9 400 aa15.48■□□□□ 0.07
SSBP3-208ENST00000444533 GOLPH3LQ9H4A5 285 aa15.48■□□□□ 0.07
SSBP3-208ENST00000444533 TMEM265A0A087WTH1 108 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 HNRNPDLO14979 420 aaKnown RBP15.47■□□□□ 0.07
SSBP3-208ENST00000444533 B4GALT5O43286 388 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 ZNF623O75123 536 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 SMC2O95347 1197 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 NPTXRO95502 500 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms