RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 OPHN1O60890 802 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 MPIG6BO95866 241 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 FAHP16930 419 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 MAN1A1P33908 653 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 GEMIN4P57678 1058 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 PUM3Q15397 648 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 CCDC38Q502W7 563 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 NKAPLQ5M9Q1 402 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 JAKMIP3Q5VZ66 844 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 PRR23CQ6ZRP0 262 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 CABP7Q86V35 215 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 ASB11Q8WXH4 323 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 ANKS1AQ92625 1134 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 DBNDD2Q9BQY9 259 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 AP5M1Q9H0R1 490 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 PGAP2Q9UHJ9 254 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 ACSL6Q9UKU0 697 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 SYNPO2Q9UMS6 1093 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 CFAP20Q9Y6A4 193 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 USP19O94966 1318 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 A0A1W2PQJ5 194 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 NOTOA8MTQ0 251 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 CLGNO14967 610 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 EPB41L2O43491 1005 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 FRS3O43559 492 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 ZNF500O60304 480 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 FUT4P22083 530 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 PMS2P11Q13670 270 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 SDR16C5Q8N3Y7 309 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 TTLL11Q8NHH1 800 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 IL31RAQ8NI17 732 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 RSAD2Q8WXG1 361 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 RAB24Q969Q5 203 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 TP53INP1Q96A56 240 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 ARL8AQ96BM9 186 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 GCC1Q96CN9 775 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 SLC35A4Q96G79 324 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 HRASLS5Q96KN8 279 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 PAGR1Q9BTK6 254 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 AMNQ9BXJ7 453 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 GREM2Q9H772 168 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 RRN3Q9NYV6 651 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 PCDHB6Q9Y5E3 794 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 F8W8V4 182 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 EXOC5O00471 708 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 CYP26A1O43174 497 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 FGF18O76093 207 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 PAPLNO95428 1278 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 LDHCP07864 332 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 HSD3B1P14060 373 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 CD96P40200 585 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 HK3P52790 923 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 ICA1Q05084 483 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 MGAT2Q10469 447 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 NOGQ13253 232 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 NR0B2Q15466 257 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 AOC3Q16853 763 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 BICRALQ6AI39 1079 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 LRSAM1Q6UWE0 723 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 BTNL9Q6UXG8 535 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 CCDC33Q8N5R6 958 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 RNF152Q8N8N0 203 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 PPHLN1Q8NEY8 458 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 NSUN6Q8TEA1 469 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 ZNF622Q969S3 477 aaKnown RBP eCLIP4.87□□□□□ -1.637e-8■■□□□ 13.4
CDC42BPA-207ENST00000441725 SKA1Q96BD8 255 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 PTPN18Q99952 460 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 ADI1Q9BV57 179 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 CARS2Q9HA77 564 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 PADI4Q9UM07 663 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 SLC4A7Q9Y6M7 1214 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 DDX3XO00571 662 aaKnown RBP eCLIP4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 PHGDHO43175 533 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 PTGS1P23219 599 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 NKX6-1P78426 367 aaPredicted RBP4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 SEPT2Q15019 361 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 NOMO1Q15155 1222 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 SLC14A2Q15849 920 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 CD276Q5ZPR3 534 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 GALNT18Q6P9A2 607 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 TTC7BQ86TV6 843 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 DRC7Q8IY82 874 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 CDYL2Q8N8U2 506 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 NETO2Q8NC67 525 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 IL17REQ8NFR9 667 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 RPGRQ92834 1020 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 TRIM63Q969Q1 353 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 TBC1D20Q96BZ9 403 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 PPP1R16BQ96T49 567 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 PITHD1Q9GZP4 211 aaPredicted RBP4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 SEMA6BQ9H3T3 888 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 KIAA1586Q9HCI6 787 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 SLC39A2Q9NP94 309 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 ARHGAP28Q9P2N2 729 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 NRBP1Q9UHY1 535 aa4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 MAGED2Q9UNF1 606 aaPredicted RBP4.87□□□□□ -1.63
CDC42BPA-207ENST00000441725 H3BUI4 141 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 SLC16A6O15403 523 aa4.86□□□□□ -1.63
CDC42BPA-207ENST00000441725 KITP10721 976 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms