RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 MPHOSPH10O00566 681 aaKnown RBP21.83■■□□□ 1.08
SHOX2-203ENST00000441443 KCNJ1P48048 391 aa21.83■■□□□ 1.08
SHOX2-203ENST00000441443 CCDC137Q6PK04 289 aaKnown RBP21.83■■□□□ 1.08
SHOX2-203ENST00000441443 VSTM1Q6UX27 236 aa21.83■■□□□ 1.08
SHOX2-203ENST00000441443 BTNL9Q6UXG8 535 aa21.83■■□□□ 1.08
SHOX2-203ENST00000441443 PFASO15067 1338 aa21.83■■□□□ 1.08
SHOX2-203ENST00000441443 MEIS1O00470 390 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 TMEM253P0C7T8 217 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 SFR1Q86XK3 245 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 GJB6O95452 261 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 RHBDL3P58872 404 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 KCNA1Q09470 495 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 MPP2Q14168 576 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 DIS3Q9Y2L1 958 aaKnown RBP21.82■■□□□ 1.08
SHOX2-203ENST00000441443 ALG6Q9Y672 507 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 TCRBV7S2A1N4TA0A589 114 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 A6NHS1 94 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 DPP8Q6V1X1 898 aaPredicted RBP21.82■■□□□ 1.08
SHOX2-203ENST00000441443 SEPT14Q6ZU15 432 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 UTP4Q969X6 686 aaKnown RBP21.82■■□□□ 1.08
SHOX2-203ENST00000441443 POP1Q99575 1024 aaKnown RBP21.82■■□□□ 1.08
SHOX2-203ENST00000441443 TMEM109Q9BVC6 243 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 DNAJC17Q9NVM6 304 aaKnown RBP21.82■■□□□ 1.08
SHOX2-203ENST00000441443 DAGLAQ9Y4D2 1042 aa21.82■■□□□ 1.08
SHOX2-203ENST00000441443 NCANO14594 1321 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 MED24O75448 989 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 RARGP13631 454 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 PSMC6P62333 389 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 C16orf86Q6ZW13 317 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 ANKLE1Q8NAG6 615 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 TRAF3IP3Q9Y228 551 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 ATAD5Q96QE3 1844 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 DPPA5A6NC42 116 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 ATP4AP20648 1035 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 ANXA13P27216 316 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 DRAP1Q14919 205 aaPredicted RBP21.81■■□□□ 1.08
SHOX2-203ENST00000441443 GNPTABQ3T906 1256 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 CROCCP2Q86T23 111 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 CCDC105Q8IYK2 499 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 TGS1Q96RS0 853 aaKnown RBP21.81■■□□□ 1.08
SHOX2-203ENST00000441443 RIOX1Q9H6W3 641 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 PCDHA3Q9Y5H8 950 aa21.81■■□□□ 1.08
SHOX2-203ENST00000441443 KDM3AQ9Y4C1 1321 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 HIP1RO75146 1068 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 NR3C1P04150 777 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 PDHA1P08559 390 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 LMNB1P20700 586 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 CHRNA3P32297 505 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 SOX5P35711 763 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 CTCFP49711 727 aaPredicted RBP21.8■■□□□ 1.08
SHOX2-203ENST00000441443 PABPC4Q13310 644 aaKnown RBP eCLIP21.8■■□□□ 1.08
SHOX2-203ENST00000441443 TNIP1Q15025 636 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 CGB2Q6NT52 195 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 NEDD1Q8NHV4 660 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 USP40Q9NVE5 1235 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 LUC7L3O95232 432 aaKnown RBP21.8■■□□□ 1.08
SHOX2-203ENST00000441443 CACNB3P54284 484 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 SNX1Q13596 522 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 CRY2Q49AN0 593 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 DHX36Q9H2U1 1008 aaKnown RBP21.8■■□□□ 1.08
SHOX2-203ENST00000441443 CDC42EP4Q9H3Q1 356 aaKnown RBP21.8■■□□□ 1.08
SHOX2-203ENST00000441443 FAM196BA6NMK8 535 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 BBOX1O75936 387 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 AKR1B1P15121 316 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 MFSD5Q6N075 450 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 ZC3H12CQ9C0D7 883 aaKnown RBP21.8■■□□□ 1.08
SHOX2-203ENST00000441443 KLHL14Q9P2G3 628 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 PRKAG3Q9UGI9 489 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 DNAJC12Q9UKB3 198 aa21.8■■□□□ 1.08
SHOX2-203ENST00000441443 ROBO3Q96MS0 1386 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 PODXLO00592 558 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 LIN7AO14910 233 aaPredicted RBP21.79■■□□□ 1.08
SHOX2-203ENST00000441443 SLC12A3P55017 1021 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 ECHDC2Q86YB7 292 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 TMEM237Q96Q45 408 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 TRIM7Q9C029 511 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 QTRT2Q9H974 415 aaKnown RBP21.79■■□□□ 1.08
SHOX2-203ENST00000441443 PARP2Q9UGN5 583 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 TBK1Q9UHD2 729 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 RSPH10B2B2RC85 870 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 O00370 1275 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 RSPH10BP0C881 870 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 IL1R1P14778 569 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 SLC16A2P36021 539 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 HYIQ5T013 277 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 FAM47EQ6ZV65 393 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 CKAP2Q8WWK9 683 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 REEP2Q9BRK0 252 aa21.79■■□□□ 1.08
SHOX2-203ENST00000441443 PPEF1O14829 653 aaPredicted RBP21.78■■□□□ 1.08
SHOX2-203ENST00000441443 CALUO43852 315 aaPredicted RBP21.78■■□□□ 1.08
SHOX2-203ENST00000441443 TNFAIP3P21580 790 aa21.78■■□□□ 1.08
SHOX2-203ENST00000441443 TUBP50607 506 aa21.78■■□□□ 1.08
SHOX2-203ENST00000441443 GIT2Q14161 759 aa21.78■■□□□ 1.08
SHOX2-203ENST00000441443 CTTNQ14247 550 aaKnown RBP21.78■■□□□ 1.08
SHOX2-203ENST00000441443 ARHGAP44Q17R89 818 aa21.78■■□□□ 1.08
SHOX2-203ENST00000441443 DDX4Q9NQI0 724 aaKnown RBP21.78■■□□□ 1.08
SHOX2-203ENST00000441443 UNC5CO95185 931 aa21.78■■□□□ 1.08
SHOX2-203ENST00000441443 BRAFP15056 766 aa21.78■■□□□ 1.08
SHOX2-203ENST00000441443 STX2P32856 288 aa21.78■■□□□ 1.08
SHOX2-203ENST00000441443 PCK1P35558 622 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms