RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 C2orf40Q9H1Z8 148 aa13.55□□□□□ -0.24
HLA-DOB-206ENST00000438763 IKZF4Q9H2S9 585 aa13.55□□□□□ -0.24
HLA-DOB-206ENST00000438763 METTL14Q9HCE5 456 aaKnown RBP13.55□□□□□ -0.24
HLA-DOB-206ENST00000438763 A0A1W2PPC1 479 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 PGK1P00558 417 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 PIGRP01833 764 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 EPB41P11171 864 aaKnown RBP13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 PSMC2P35998 433 aaKnown RBP13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 PBX1P40424 430 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 CLCN3P51790 818 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 VWA3BQ502W6 1294 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 CDCA2Q69YH5 1023 aaPredicted RBP13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 RHPN2Q8IUC4 686 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 TRIM59Q8IWR1 403 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 ZBTB8OSQ8IWT0 167 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 KLHDC9Q8NEP7 349 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 TRIM44Q96DX7 344 aaPredicted RBP13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 NFKBIZQ9BYH8 718 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 XPNPEP3Q9NQH7 507 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 SETD4Q9NVD3 440 aa13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 DDX20Q9UHI6 824 aaKnown RBP13.54□□□□□ -0.24
HLA-DOB-206ENST00000438763 MBLAC1A4D2B0 266 aaPredicted RBP13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 MYADML2A6NDP7 307 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 ANKRD63C9JTQ0 380 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 MSCO60682 206 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 AKAP3O75969 853 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 SRGAP2CP0DJJ0 459 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 GNAT1P11488 350 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 CCL5P13501 91 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 CST5P28325 142 aaPredicted RBP13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 GRK4P32298 578 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 GJA8P48165 433 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 ADAM17P78536 824 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 CDC42EP1Q00587 391 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 UBXN1Q04323 297 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 PPP2R3AQ06190 1150 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 MIIPQ5JXC2 388 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 CEP135Q66GS9 1140 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 SPECC1LQ69YQ0 1117 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 RNF149Q8NC42 400 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 LMBR1Q8WVP7 490 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 ARMCX3Q9UH62 379 aaPredicted RBP13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 FRMD4BQ9Y2L6 1034 aa13.53□□□□□ -0.24
HLA-DOB-206ENST00000438763 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 A0A1W2PQC6 194 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 MAPK13O15264 365 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 EXOC3O60645 756 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 INHAP05111 366 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 GARTP22102 1010 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 CASP4P49662 377 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 CYP2J2P51589 502 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 PTENP60484 403 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 FKBP15Q5T1M5 1219 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 SLFN12LQ6IEE8 588 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 CCSAPQ6IQ19 270 aaPredicted RBP13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 ARMCX5Q6P1M9 558 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 NFRKBQ6P4R8 1299 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 CCDC186Q7Z3E2 898 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 FAM186BQ8IYM0 893 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 KIAA0319LQ8IZA0 1049 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 XXYLT1Q8NBI6 393 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 ZBTB10Q96DT7 871 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 BORCS6Q96GS4 357 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 MAP7D2Q96T17 732 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 CCDC113Q9H0I3 377 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 RNF208Q9H0X6 261 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 NDST4Q9H3R1 872 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 HMX1Q9NP08 348 aaPredicted RBP13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 HSPBP1Q9NZL4 362 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 STXBP5LQ9Y2K9 1186 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 STYXL1Q9Y6J8 313 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 ITIH6Q6UXX5 1313 aa13.52□□□□□ -0.25
HLA-DOB-206ENST00000438763 C17orf102A2RUQ5 167 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 TISP43B9A030 160 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 PES1O00541 588 aaKnown RBP13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 HNRNPDLO14979 420 aaKnown RBP13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 KIAA0391O15091 583 aaKnown RBP13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 EVI5O60447 810 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 GJB1P08034 283 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 ADSSP30520 456 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 HOXC8P31273 242 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 LIG4P49917 911 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 GSDMDP57764 484 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 CHMP4BP1P59074 171 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 TBX2Q13207 712 aaPredicted RBP13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 MAPK6Q16659 721 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 SLC39A4Q6P5W5 647 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 ZPBP2Q6X784 338 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 RNF180Q86T96 592 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 C7orf31Q8N865 590 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 PCSK9Q8NBP7 692 aaKnown RBP13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 BICD1Q96G01 975 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 NLRP4Q96MN2 994 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 ERGIC2Q96RQ1 377 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 CBWD1Q9BRT8 395 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 FZD8Q9H461 694 aa13.51□□□□□ -0.25
HLA-DOB-206ENST00000438763 PCIF1Q9H4Z3 704 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms