RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 WWC2Q6AWC2 1192 aa16.91■□□□□ 0.3
NELFE-204ENST00000436289 POTEGQ6S5H5 508 aa16.91■□□□□ 0.3
NELFE-204ENST00000436289 SYNE3Q6ZMZ3 975 aa16.91■□□□□ 0.3
NELFE-204ENST00000436289 ZNF410Q86VK4 478 aa16.91■□□□□ 0.3
NELFE-204ENST00000436289 ZNF280BQ86YH2 543 aa16.91■□□□□ 0.3
NELFE-204ENST00000436289 NELL1Q92832 810 aa16.91■□□□□ 0.3
NELFE-204ENST00000436289 LPPQ93052 612 aa16.91■□□□□ 0.3
NELFE-204ENST00000436289 PGBD1Q96JS3 809 aa16.91■□□□□ 0.3
NELFE-204ENST00000436289 FOXQ1Q9C009 403 aa16.91■□□□□ 0.3
NELFE-204ENST00000436289 NT5C3AQ9H0P0 336 aa16.91■□□□□ 0.3
NELFE-204ENST00000436289 UBN1Q9NPG3 1134 aa16.91■□□□□ 0.3
NELFE-204ENST00000436289 GMEB2Q9UKD1 530 aa16.91■□□□□ 0.3
NELFE-204ENST00000436289 C2orf16Q68DN1 1984 aa16.9■□□□□ 0.3
NELFE-204ENST00000436289 SH2B2O14492 632 aaPredicted RBP16.9■□□□□ 0.3
NELFE-204ENST00000436289 GAS2O43903 313 aaKnown RBP16.9■□□□□ 0.3
NELFE-204ENST00000436289 FGFR4P22455 802 aa16.9■□□□□ 0.3
NELFE-204ENST00000436289 CSTF1Q05048 431 aaKnown RBP16.9■□□□□ 0.3
NELFE-204ENST00000436289 MAP4K1Q92918 833 aa16.9■□□□□ 0.3
NELFE-204ENST00000436289 HERC2P3Q9BVR0 1158 aa16.9■□□□□ 0.3
NELFE-204ENST00000436289 PRKD2Q9BZL6 878 aa16.9■□□□□ 0.3
NELFE-204ENST00000436289 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.9■□□□□ 0.3
NELFE-204ENST00000436289 RBM28Q9NW13 759 aaKnown RBP16.9■□□□□ 0.3
NELFE-204ENST00000436289 SMG5Q9UPR3 1016 aaKnown RBP16.9■□□□□ 0.3
NELFE-204ENST00000436289 PIN4Q9Y237 131 aaKnown RBP16.9■□□□□ 0.3
NELFE-204ENST00000436289 NUMBLQ9Y6R0 609 aa16.9■□□□□ 0.3
NELFE-204ENST00000436289 DCDC2BA2VCK2 349 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 NRP1O14786 923 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 NR1I2O75469 434 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 SFNP31947 248 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 GLUD2P49448 558 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 GPC5P78333 572 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 SLC44A4Q53GD3 710 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 ZBTB41Q5SVQ8 909 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 MTSS1LQ765P7 747 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 MRPL10Q7Z7H8 261 aaKnown RBP16.89■□□□□ 0.29
NELFE-204ENST00000436289 CRYGNQ8WXF5 182 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 ZNF707Q96C28 371 aaPredicted RBP16.89■□□□□ 0.29
NELFE-204ENST00000436289 ZNF668Q96K58 619 aaPredicted RBP16.89■□□□□ 0.29
NELFE-204ENST00000436289 DISC1Q9NRI5 854 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 BARHL2Q9NY43 387 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 USP18Q9UMW8 372 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 PCDHB2Q9Y5E7 798 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 ATRXP46100 2492 aa16.89■□□□□ 0.29
NELFE-204ENST00000436289 CFAP47Q6ZTR5 3102 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 FAM170BA6NMN3 283 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 C2CD2LO14523 706 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 FOXD2O60548 495 aaPredicted RBP16.88■□□□□ 0.29
NELFE-204ENST00000436289 LRP3O75074 770 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 RFPL2O75678 378 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 DDHD2O94830 711 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 RXRAP19793 462 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 NRLP54845 237 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 DSG1Q02413 1049 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 CREMQ03060 361 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 TARBP2Q15633 366 aaKnown RBP16.88■□□□□ 0.29
NELFE-204ENST00000436289 MLF2Q15773 248 aaPredicted RBP16.88■□□□□ 0.29
NELFE-204ENST00000436289 CATSPER4Q7RTX7 472 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 SGMS1Q86VZ5 419 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 CNNM3Q8NE01 707 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 NETO1Q8TDF5 533 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 DDX1Q92499 740 aaKnown RBP16.88■□□□□ 0.29
NELFE-204ENST00000436289 JPH2Q9BR39 696 aaPredicted RBP16.88■□□□□ 0.29
NELFE-204ENST00000436289 NIFKQ9BYG3 293 aaKnown RBP16.88■□□□□ 0.29
NELFE-204ENST00000436289 RSAD1Q9HA92 442 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 RAB23Q9ULC3 237 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 TAF6LQ9Y6J9 622 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 ZFHX4Q86UP3 3567 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 DOCK8Q8NF50 2099 aa16.88■□□□□ 0.29
NELFE-204ENST00000436289 USP24Q9UPU5 2620 aa16.87■□□□□ 0.29
NELFE-204ENST00000436289 A0A087WZ62 844 aa16.87■□□□□ 0.29
NELFE-204ENST00000436289 ZNF862O60290 1169 aa16.87■□□□□ 0.29
NELFE-204ENST00000436289 CSDE1O75534 798 aaKnown RBP16.87■□□□□ 0.29
NELFE-204ENST00000436289 TGM1P22735 817 aa16.87■□□□□ 0.29
NELFE-204ENST00000436289 RPS9P46781 194 aaKnown RBP16.87■□□□□ 0.29
NELFE-204ENST00000436289 PRKCEQ02156 737 aa16.87■□□□□ 0.29
NELFE-204ENST00000436289 SNW1Q13573 536 aaKnown RBP16.87■□□□□ 0.29
NELFE-204ENST00000436289 UBXN2BQ14CS0 331 aa16.87■□□□□ 0.29
NELFE-204ENST00000436289 LONRF3Q496Y0 759 aa16.87■□□□□ 0.29
NELFE-204ENST00000436289 TYW1BQ6NUM6 668 aa16.87■□□□□ 0.29
NELFE-204ENST00000436289 AGMOQ6ZNB7 445 aa16.87■□□□□ 0.29
NELFE-204ENST00000436289 GET4Q7L5D6 327 aaPredicted RBP16.87■□□□□ 0.29
NELFE-204ENST00000436289 RNF168Q8IYW5 571 aaPredicted RBP16.87■□□□□ 0.29
NELFE-204ENST00000436289 CLDN23Q96B33 292 aa16.87■□□□□ 0.29
NELFE-204ENST00000436289 FDXACB1Q9BRP7 624 aaPredicted RBP16.87■□□□□ 0.29
NELFE-204ENST00000436289 FNIP2Q9P278 1114 aa16.87■□□□□ 0.29
NELFE-204ENST00000436289 MRPS17Q9Y2R5 130 aaKnown RBP16.87■□□□□ 0.29
NELFE-204ENST00000436289 BAHCC1Q9P281 2608 aa16.86■□□□□ 0.29
NELFE-204ENST00000436289 IGKV6-21A0A0C4DH24 114 aa16.86■□□□□ 0.29
NELFE-204ENST00000436289 MEIS3P2A8K0S8 358 aa16.86■□□□□ 0.29
NELFE-204ENST00000436289 SLC30A4O14863 429 aa16.86■□□□□ 0.29
NELFE-204ENST00000436289 EFEMP2O95967 443 aa16.86■□□□□ 0.29
NELFE-204ENST00000436289 FSHRP23945 695 aa16.86■□□□□ 0.29
NELFE-204ENST00000436289 CIITAP33076 1130 aa16.86■□□□□ 0.29
NELFE-204ENST00000436289 JAK3P52333 1124 aa16.86■□□□□ 0.29
NELFE-204ENST00000436289 PPP2R5DQ14738 602 aa16.86■□□□□ 0.29
NELFE-204ENST00000436289 MAMSTRQ6ZN01 415 aa16.86■□□□□ 0.29
NELFE-204ENST00000436289 CELF5Q8N6W0 485 aaKnown RBP16.86■□□□□ 0.29
NELFE-204ENST00000436289 RDM1Q8NG50 284 aa16.86■□□□□ 0.29
NELFE-204ENST00000436289 RIT2Q99578 217 aa16.86■□□□□ 0.29
NELFE-204ENST00000436289 CHST7Q9NS84 486 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms