RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 CCDC13Q8IYE1 715 aa5.73□□□□□ -1.49
PTPN4-203ENST00000430976 GALNT15Q8N3T1 639 aa5.73□□□□□ -1.49
PTPN4-203ENST00000430976 TBC1D19Q8N5T2 526 aa5.73□□□□□ -1.49
PTPN4-203ENST00000430976 METTL6Q8TCB7 284 aa5.73□□□□□ -1.49
PTPN4-203ENST00000430976 CRB3Q9BUF7 120 aa5.73□□□□□ -1.49
PTPN4-203ENST00000430976 NUSAP1Q9BXS6 441 aaKnown RBP5.73□□□□□ -1.49
PTPN4-203ENST00000430976 NIFKQ9BYG3 293 aaKnown RBP5.73□□□□□ -1.49
PTPN4-203ENST00000430976 GGT7Q9UJ14 662 aa5.73□□□□□ -1.49
PTPN4-203ENST00000430976 VANGL2Q9ULK5 521 aa5.73□□□□□ -1.49
PTPN4-203ENST00000430976 PCDHGB4Q9UN71 923 aa5.73□□□□□ -1.49
PTPN4-203ENST00000430976 KANK1Q14678 1352 aa5.73□□□□□ -1.49
PTPN4-203ENST00000430976 ATAD2BQ9ULI0 1458 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 MAGEB16A2A368 324 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 CCDC69A6NI79 296 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 RRP8O43159 456 aaKnown RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SORBS3O60504 671 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SERPINI2O75830 405 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 HMBSP08397 361 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 PF4V1P10720 104 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 GHRP10912 638 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 BTF3P20290 206 aaKnown RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 VAMP1P23763 118 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 PON1P27169 355 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 PRKAR1BP31321 381 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 PHBP35232 272 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 IST1P53990 364 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 NLRP6P59044 892 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 CCNA1P78396 465 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 APBA1Q02410 837 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 DNAJC3Q13217 504 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 ZNF674Q2M3X9 581 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 PDE12Q6L8Q7 609 aaKnown RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 DUS1LQ6P1R4 473 aaKnown RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 NLRC3Q7RTR2 1065 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 ATG9AQ7Z3C6 839 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 TBC1D1Q86TI0 1168 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SNX31Q8N9S9 440 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 RNF169Q8NCN4 708 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 FAM149B1Q96BN6 582 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SENP6Q9GZR1 1112 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 PRDM5Q9NQX1 630 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 FHOD1Q9Y613 1164 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SNCAIPQ9Y6H5 919 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 CYP2D7A0A087X1C5 515 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SMCO2A6NFE2 343 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 HAT1O14929 419 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 TLR2O60603 784 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 C7P10643 843 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 POLR2EP19388 210 aaKnown RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 RFC5P40937 340 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 DOC2AQ14183 400 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SF3B4Q15427 424 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 PTPN21Q16825 1174 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 MCMDC2Q4G0Z9 681 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 STXBP4Q6ZWJ1 553 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 UNC45BQ8IWX7 931 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 KIAA2013Q8IYS2 634 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 LRRC59Q96AG4 307 aaKnown RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 DEPDC7Q96QD5 511 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 TNKS2Q9H2K2 1166 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 A1CFQ9NQ94 594 aaKnown RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SNTG2Q9NY99 539 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 DUSP12Q9UNI6 340 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 RPH3AQ9Y2J0 694 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 H7C0C1 242 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 AP3D1O14617 1153 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 CALB1P05937 261 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 P4HA1P13674 534 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 GAP43P17677 238 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SLC9A1P19634 815 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 ARHGAP25P42331 645 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 OR1G1P47890 313 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 CALCOCO2Q13137 446 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 PPIL2Q13356 520 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 C6orf132Q5T0Z8 1188 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 MAMDC2Q7Z304 686 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 CNNM3Q8NE01 707 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SLC9A6Q92581 669 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 LTV1Q96GA3 475 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 PHACTR3Q96KR7 559 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SEC62Q99442 399 aaKnown RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 MNTQ99583 582 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 NTPCRQ9BSD7 190 aaKnown RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 MENTQ9BUN1 341 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 KIFC3Q9BVG8 833 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 HEMGNQ9BXL5 484 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 ELAC1Q9H777 363 aaKnown RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 ATP13A1Q9HD20 1204 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SLC39A2Q9NP94 309 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 SPTLC3Q9NUV7 552 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 AIPL1Q9NZN9 384 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 CNTN3Q9P232 1028 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 TRIM10Q9UDY6 481 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 ADD3Q9UEY8 706 aaKnown RBP5.72□□□□□ -1.49
PTPN4-203ENST00000430976 PLCL2Q9UPR0 1127 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 RWDD3Q9Y3V2 267 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 HEY1Q9Y5J3 304 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms