RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 STARD6P59095 220 aa11.37□□□□□ -0.59
ATG4B-211ENST00000429899 DSC3Q14574 896 aa11.37□□□□□ -0.59
ATG4B-211ENST00000429899 BMS1Q14692 1282 aaKnown RBP11.37□□□□□ -0.59
ATG4B-211ENST00000429899 CLLU1OSQ5K130 101 aa11.37□□□□□ -0.59
ATG4B-211ENST00000429899 LAIR1Q6GTX8 287 aa11.37□□□□□ -0.59
ATG4B-211ENST00000429899 PRR23BQ6ZRT6 265 aa11.37□□□□□ -0.59
ATG4B-211ENST00000429899 SAMD3Q8N6K7 520 aa11.37□□□□□ -0.59
ATG4B-211ENST00000429899 FAM184AQ8NB25 1140 aa11.37□□□□□ -0.59
ATG4B-211ENST00000429899 SEPT1Q8WYJ6 367 aa11.37□□□□□ -0.59
ATG4B-211ENST00000429899 AIFM3Q96NN9 605 aa11.37□□□□□ -0.59
ATG4B-211ENST00000429899 SMARCAD1Q9H4L7 1026 aa11.37□□□□□ -0.59
ATG4B-211ENST00000429899 ELAC1Q9H777 363 aaKnown RBP11.37□□□□□ -0.59
ATG4B-211ENST00000429899 KIF3AQ9Y496 699 aa11.37□□□□□ -0.59
ATG4B-211ENST00000429899 IRAK3Q9Y616 596 aa11.37□□□□□ -0.59
ATG4B-211ENST00000429899 SMIM35A0A1B0GVV1 85 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 KANSL1LA0AUZ9 987 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 TAF4O00268 1085 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 ZBTB5O15062 677 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 PRPF3O43395 683 aaKnown RBP11.36□□□□□ -0.59
ATG4B-211ENST00000429899 RETP07949 1114 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 ZSCAN22P10073 491 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-211ENST00000429899 SMARCA1P28370 1054 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 BCAR1P56945 870 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 SSRP1Q08945 709 aaKnown RBP11.36□□□□□ -0.59
ATG4B-211ENST00000429899 SNW1Q13573 536 aaKnown RBP11.36□□□□□ -0.59
ATG4B-211ENST00000429899 LARP1BQ659C4 914 aaKnown RBP11.36□□□□□ -0.59
ATG4B-211ENST00000429899 FAM228AQ86W67 206 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 TRIM22Q8IYM9 498 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 BCL7CQ8WUZ0 217 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-211ENST00000429899 SHDQ96IW2 340 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 PPP1R16BQ96T49 567 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 LZTS2Q9BRK4 669 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 EPS15L1Q9UBC2 864 aa11.36□□□□□ -0.59
ATG4B-211ENST00000429899 TDRD15B5MCY1 1934 aaKnown RBP11.36□□□□□ -0.59
ATG4B-211ENST00000429899 BPTFQ12830 3046 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 VPS37CA5D8V6 355 aaPredicted RBP11.35□□□□□ -0.59
ATG4B-211ENST00000429899 FAM170BA6NMN3 283 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 KLRF2D3W0D1 207 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 LRP3O75074 770 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 F13A1P00488 732 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 CTSAP10619 480 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 PDIA4P13667 645 aaKnown RBP11.35□□□□□ -0.59
ATG4B-211ENST00000429899 CD72P21854 359 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 CLCN4P51793 760 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 RESTQ13127 1097 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 CSRP2Q16527 193 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 MTHFD1LQ6UB35 978 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 C15orf39Q6ZRI6 1047 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 CLEC17AQ6ZS10 378 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 HOMER1Q86YM7 354 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 NME8Q8N427 588 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 BBXQ8WY36 941 aaPredicted RBP11.35□□□□□ -0.59
ATG4B-211ENST00000429899 TNPO1Q92973 898 aaKnown RBP11.35□□□□□ -0.59
ATG4B-211ENST00000429899 NXPE3Q969Y0 559 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 RPP25Q9BUL9 199 aaKnown RBP11.35□□□□□ -0.59
ATG4B-211ENST00000429899 VN1R3Q9BXE9 311 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 RIOX1Q9H6W3 641 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 SLC2A4RGQ9NR83 387 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 PKD2L1Q9P0L9 805 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 EML5Q05BV3 1969 aa11.35□□□□□ -0.59
ATG4B-211ENST00000429899 GPR182O15218 404 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 MYBP10242 640 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 SPINK2P20155 84 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 FOSBP53539 338 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 HTR4Q13639 388 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 PFKFB3Q16875 520 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-211ENST00000429899 PCNX4Q63HM2 1172 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 KIAA0319LQ8IZA0 1049 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 ABI1Q8IZP0 508 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 CCDC82Q8N4S0 544 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 GIMAP8Q8ND71 665 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-211ENST00000429899 FBXO18Q8NFZ0 1043 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 WASF1Q92558 559 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 STAMQ92783 540 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 TMEM169Q96HH4 297 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 C8orf76Q96K31 380 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 OSMRQ99650 979 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 DDX23Q9BUQ8 820 aaKnown RBP11.34□□□□□ -0.59
ATG4B-211ENST00000429899 WDR6Q9NNW5 1121 aaKnown RBP11.34□□□□□ -0.59
ATG4B-211ENST00000429899 GJB4Q9NTQ9 266 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 TICRRQ7Z2Z1 1910 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 CLUHO75153 1309 aa11.34□□□□□ -0.59
ATG4B-211ENST00000429899 hCG_1642624A0A1W2PR95 340 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 CYSRT1A8MQ03 144 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 ANHXE9PGG2 379 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 HOXA2O43364 376 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 CNPP09543 421 aaKnown RBP11.33□□□□□ -0.6
ATG4B-211ENST00000429899 KLRC1P26715 233 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 ALDH7A1P49419 539 aaKnown RBP11.33□□□□□ -0.6
ATG4B-211ENST00000429899 GPC5P78333 572 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 FOXC1Q12948 553 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 MLF2Q15773 248 aaPredicted RBP11.33□□□□□ -0.6
ATG4B-211ENST00000429899 KIZQ2M2Z5 673 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 AASDHQ4L235 1098 aaPredicted RBP11.33□□□□□ -0.6
ATG4B-211ENST00000429899 DDX53Q86TM3 631 aaKnown RBP11.33□□□□□ -0.6
ATG4B-211ENST00000429899 PPFIBP1Q86W92 1011 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 ECHDC2Q86YB7 292 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 RNF169Q8NCN4 708 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 HELQQ8TDG4 1101 aa11.33□□□□□ -0.6
ATG4B-211ENST00000429899 KLHL5Q96PQ7 755 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms