RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 RSAD1Q9HA92 442 aa20.45■□□□□ 0.86
PSPC1-202ENST00000427943 DNAJB4Q9UDY4 337 aa20.45■□□□□ 0.86
PSPC1-202ENST00000427943 B4GALT3O60512 393 aa20.44■□□□□ 0.86
PSPC1-202ENST00000427943 U2AF2P26368 475 aaKnown RBP eCLIP20.44■□□□□ 0.86
PSPC1-202ENST00000427943 CA8P35219 290 aa20.44■□□□□ 0.86
PSPC1-202ENST00000427943 TRAPPC10P48553 1259 aa20.44■□□□□ 0.86
PSPC1-202ENST00000427943 AFF1P51825 1210 aaKnown RBP20.44■□□□□ 0.86
PSPC1-202ENST00000427943 MBTD1Q05BQ5 628 aa20.44■□□□□ 0.86
PSPC1-202ENST00000427943 IFNLR1Q8IU57 520 aaPredicted RBP20.44■□□□□ 0.86
PSPC1-202ENST00000427943 ERMNQ8TAM6 284 aa20.44■□□□□ 0.86
PSPC1-202ENST00000427943 TMEM169Q96HH4 297 aa20.44■□□□□ 0.86
PSPC1-202ENST00000427943 CDCA3Q99618 268 aaPredicted RBP20.44■□□□□ 0.86
PSPC1-202ENST00000427943 POLR3CQ9BUI4 534 aaPredicted RBP20.44■□□□□ 0.86
PSPC1-202ENST00000427943 C1QTNF1Q9BXJ1 281 aa20.44■□□□□ 0.86
PSPC1-202ENST00000427943 UPF2Q9HAU5 1272 aaKnown RBP20.44■□□□□ 0.86
PSPC1-202ENST00000427943 PRKAG3Q9UGI9 489 aa20.44■□□□□ 0.86
PSPC1-202ENST00000427943 XRCC6P12956 609 aaKnown RBP eCLIP20.43■□□□□ 0.86
PSPC1-202ENST00000427943 TOB1P50616 345 aaPredicted RBP20.43■□□□□ 0.86
PSPC1-202ENST00000427943 AMHR2Q16671 573 aa20.43■□□□□ 0.86
PSPC1-202ENST00000427943 LLGL2Q6P1M3 1020 aa20.43■□□□□ 0.86
PSPC1-202ENST00000427943 MRPL10Q7Z7H8 261 aaKnown RBP20.43■□□□□ 0.86
PSPC1-202ENST00000427943 ADHFE1Q8IWW8 467 aa20.43■□□□□ 0.86
PSPC1-202ENST00000427943 C4orf32Q8N8J7 132 aa20.43■□□□□ 0.86
PSPC1-202ENST00000427943 SMRP1Q8NCR6 262 aa20.43■□□□□ 0.86
PSPC1-202ENST00000427943 SMG8Q8ND04 991 aaKnown RBP20.43■□□□□ 0.86
PSPC1-202ENST00000427943 URGCPQ8TCY9 931 aa20.43■□□□□ 0.86
PSPC1-202ENST00000427943 BCL7CQ8WUZ0 217 aaPredicted RBP20.43■□□□□ 0.86
PSPC1-202ENST00000427943 RSPH1Q8WYR4 309 aa20.43■□□□□ 0.86
PSPC1-202ENST00000427943 TMX3Q96JJ7 454 aa20.43■□□□□ 0.86
PSPC1-202ENST00000427943 NACC1Q96RE7 527 aa20.43■□□□□ 0.86
PSPC1-202ENST00000427943 NGRNQ9NPE2 291 aaKnown RBP20.43■□□□□ 0.86
PSPC1-202ENST00000427943 DBR1Q9UK59 544 aaKnown RBP20.43■□□□□ 0.86
PSPC1-202ENST00000427943 PCDHB6Q9Y5E3 794 aa20.43■□□□□ 0.86
PSPC1-202ENST00000427943 FAM86C2PA6NEL3 165 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 LRRIQ4A6NIV6 560 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 B4GALT5O43286 388 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 EYA4O95677 639 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 ARF4P18085 180 aaPredicted RBP20.42■□□□□ 0.86
PSPC1-202ENST00000427943 NCLP19338 710 aaKnown RBP20.42■□□□□ 0.86
PSPC1-202ENST00000427943 COL9A1P20849 921 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 RPA1P27694 616 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 AXLP30530 894 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 SLC11A1P49279 550 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 POU5F1BQ06416 359 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 COASYQ13057 564 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 SMC1AQ14683 1233 aaKnown RBP20.42■□□□□ 0.86
PSPC1-202ENST00000427943 HAUS3Q68CZ6 603 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 NOTUMQ6P988 496 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 ZNF280BQ86YH2 543 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 RAPGEFL1Q9UHV5 662 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 USP15Q9Y4E8 981 aaPredicted RBP20.42■□□□□ 0.86
PSPC1-202ENST00000427943 HES2Q9Y543 173 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 IPPQ9Y573 584 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 CNTNAP2Q9UHC6 1331 aa20.42■□□□□ 0.86
PSPC1-202ENST00000427943 MYH11P35749 1972 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 FSD2A1L4K1 749 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 ARHGEF35A5YM69 484 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 DDHD2O94830 711 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 POMCP01189 267 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 GALTP07902 379 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 ITGA4P13612 1032 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 CCT6AP40227 531 aaKnown RBP20.41■□□□□ 0.86
PSPC1-202ENST00000427943 FXR2P51116 673 aaKnown RBP eCLIP20.41■□□□□ 0.86
PSPC1-202ENST00000427943 PTGDRQ13258 359 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 PCBP1Q15365 356 aaKnown RBP eCLIP20.41■□□□□ 0.86
PSPC1-202ENST00000427943 ECM1Q16610 540 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 MCTP1Q6DN14 999 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 CDR2LQ86X02 465 aaPredicted RBP20.41■□□□□ 0.86
PSPC1-202ENST00000427943 MCPH1Q8NEM0 835 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 AUTS2Q8WXX7 1259 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 APOL6Q9BWW8 343 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 CSRNP2Q9H175 543 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 KIF3AQ9Y496 699 aa20.41■□□□□ 0.86
PSPC1-202ENST00000427943 C2orf71A6NGG8 1288 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 C19orf67A6NJJ6 358 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 PI4K2BG5E9Z4 385 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 MLH1P40692 756 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 NCBP1Q09161 790 aaKnown RBP20.4■□□□□ 0.86
PSPC1-202ENST00000427943 KCNC3Q14003 757 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 PADI6Q6TGC4 694 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 VPS52Q8N1B4 723 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 CNNM3Q8NE01 707 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 BSNDQ8WZ55 320 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 CCDC51Q96ER9 411 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 IGSF21Q96ID5 467 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 APOL5Q9BWW9 433 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 NFKBIZQ9BYH8 718 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 ZBP1Q9H171 429 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 RNF39Q9H2S5 420 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 NXF3Q9H4D5 531 aaKnown RBP20.4■□□□□ 0.86
PSPC1-202ENST00000427943 LRWD1Q9UFC0 647 aa20.4■□□□□ 0.86
PSPC1-202ENST00000427943 SRGAP2BP0DMP2 458 aa20.39■□□□□ 0.85
PSPC1-202ENST00000427943 GJB2P29033 226 aa20.39■□□□□ 0.85
PSPC1-202ENST00000427943 MRPL43Q8N983 215 aaKnown RBP20.39■□□□□ 0.85
PSPC1-202ENST00000427943 SNX29Q8TEQ0 813 aa20.39■□□□□ 0.85
PSPC1-202ENST00000427943 TBC1D32Q96NH3 1257 aa20.39■□□□□ 0.85
PSPC1-202ENST00000427943 FAM193BQ96PV7 902 aaPredicted RBP20.39■□□□□ 0.85
PSPC1-202ENST00000427943 POP1Q99575 1024 aaKnown RBP20.39■□□□□ 0.85
PSPC1-202ENST00000427943 TRIM6Q9C030 488 aaPredicted RBP20.39■□□□□ 0.85
PSPC1-202ENST00000427943 C11orf16Q9NQ32 467 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms