RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ACTR2P61160 394 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 RBP5P82980 135 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 USP50Q70EL3 339 aaPredicted RBP14.84□□□□□ -0.03
RPL28-202ENST00000426763 EDEM3Q9BZQ6 932 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.84□□□□□ -0.03
RPL28-202ENST00000426763 MED1Q15648 1581 aaPredicted RBP14.84□□□□□ -0.03
RPL28-202ENST00000426763 ADORA2BP29275 332 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 TFDP2Q14188 446 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 PPP6R3Q5H9R7 873 aaPredicted RBP14.84□□□□□ -0.03
RPL28-202ENST00000426763 CCDC62Q6P9F0 684 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 LRRC31Q6UY01 552 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.84□□□□□ -0.03
RPL28-202ENST00000426763 SALL3Q9BXA9 1300 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 GAS2O43903 313 aaKnown RBP14.84□□□□□ -0.03
RPL28-202ENST00000426763 TM4SF1P30408 202 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 SNRPFP62306 86 aaKnown RBP14.84□□□□□ -0.03
RPL28-202ENST00000426763 MAP1SQ66K74 1059 aaPredicted RBP14.84□□□□□ -0.03
RPL28-202ENST00000426763 HPS3Q969F9 1004 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 GLT1D1Q96MS3 346 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 FHDC1Q9C0D6 1143 aaPredicted RBP14.84□□□□□ -0.03
RPL28-202ENST00000426763 EPB41L5Q9HCM4 733 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.84□□□□□ -0.03
RPL28-202ENST00000426763 IGSF9BQ9UPX0 1349 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 EIF3DO15371 548 aaKnown RBP eCLIP14.84□□□□□ -0.03
RPL28-202ENST00000426763 BUB1BO60566 1050 aaPredicted RBP14.84□□□□□ -0.03
RPL28-202ENST00000426763 RNF40O75150 1001 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 OAS2P29728 719 aaKnown RBP14.84□□□□□ -0.03
RPL28-202ENST00000426763 PSMC1P62191 440 aaKnown RBP14.84□□□□□ -0.03
RPL28-202ENST00000426763 PDE1BQ01064 536 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 TROVE2P10155 538 aaKnown RBP eCLIP14.84□□□□□ -0.03
RPL28-202ENST00000426763 EPHB1P54762 984 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 TMEM132DQ14C87 1099 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 DHX40Q8IX18 779 aaKnown RBP14.84□□□□□ -0.03
RPL28-202ENST00000426763 HVCN1Q96D96 273 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 TRIM62Q9BVG3 475 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 UNC45AQ9H3U1 944 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 BCL2L12Q9HB09 334 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.84□□□□□ -0.03
RPL28-202ENST00000426763 SIGLEC1Q9BZZ2 1709 aa14.83□□□□□ -0.03
RPL28-202ENST00000426763 NFKBIAP25963 317 aa14.83□□□□□ -0.03
RPL28-202ENST00000426763 SOX5P35711 763 aa14.83□□□□□ -0.03
RPL28-202ENST00000426763 SREBF1P36956 1147 aa14.83□□□□□ -0.03
RPL28-202ENST00000426763 APOBEC3HQ6NTF7 200 aaKnown RBP14.83□□□□□ -0.03
RPL28-202ENST00000426763 AGAP1Q9UPQ3 857 aa14.83□□□□□ -0.03
RPL28-202ENST00000426763 DPYSL4O14531 572 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 ALDH1A1P00352 501 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 ACOT2P49753 483 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 PLTPP55058 493 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 VEPH1Q14D04 833 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 LMBRD2Q68DH5 695 aaPredicted RBP14.83□□□□□ -0.04
RPL28-202ENST00000426763 VSIG1Q86XK7 387 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 SKA2Q8WVK7 121 aaPredicted RBP14.83□□□□□ -0.04
RPL28-202ENST00000426763 COG7P83436 770 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 VGLL2Q8N8G2 317 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 ZRANB2O95218 330 aaKnown RBP eCLIP14.83□□□□□ -0.04
RPL28-202ENST00000426763 IL18RAPO95256 599 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 C2orf54Q08AI8 447 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 EDRF1Q3B7T1 1238 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 WDR72Q3MJ13 1102 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 ATF7IP2Q5U623 682 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 CATSPER3Q86XQ3 398 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 TEX2Q8IWB9 1127 aa14.83□□□□□ -0.04
RPL28-202ENST00000426763 MYBP10242 640 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 EPHB4P54760 987 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 GFPT1Q06210 699 aaPredicted RBP14.82□□□□□ -0.04
RPL28-202ENST00000426763 TMEM62Q0P6H9 643 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 SNRNP35Q16560 246 aaKnown RBP14.82□□□□□ -0.04
RPL28-202ENST00000426763 ANKRD20A3Q5VUR7 823 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 LRRC71Q8N4P6 559 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 TTC13Q8NBP0 860 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 AFG1LQ8WV93 481 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 MANSC4A6NHS7 340 aaPredicted RBP14.82□□□□□ -0.04
RPL28-202ENST00000426763 POC1B-GALNT4F8VUJ3 575 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 ZNF449Q6P9G9 518 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 LBHD1Q9BQE6 289 aaPredicted RBP14.82□□□□□ -0.04
RPL28-202ENST00000426763 SYNGAP1Q96PV0 1343 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 C17orf102A2RUQ5 167 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 PALMO75781 387 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 ITGA4P13612 1032 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 DSG3P32926 999 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 PPARDQ03181 441 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 SDCCAG8Q86SQ7 713 aaPredicted RBP14.82□□□□□ -0.04
RPL28-202ENST00000426763 ZNF564Q8TBZ8 553 aaPredicted RBP14.82□□□□□ -0.04
RPL28-202ENST00000426763 RILPQ96NA2 401 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 RIOX1Q9H6W3 641 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 C17orf75Q9HAS0 396 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 PIDD1Q9HB75 910 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 SLC38A7Q9NVC3 462 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 LIMA1Q9UHB6 759 aaKnown RBP14.82□□□□□ -0.04
RPL28-202ENST00000426763 IP6K2Q9UHH9 426 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 TTC26A0AVF1 554 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 TEX33O43247 280 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 VIL1P09327 827 aaKnown RBP14.82□□□□□ -0.04
RPL28-202ENST00000426763 DR1Q01658 176 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 THOC5Q13769 683 aaKnown RBP14.82□□□□□ -0.04
RPL28-202ENST00000426763 PTF1AQ7RTS3 328 aa14.82□□□□□ -0.04
RPL28-202ENST00000426763 SLC37A4O43826 429 aa14.81□□□□□ -0.04
RPL28-202ENST00000426763 CD4P01730 458 aa14.81□□□□□ -0.04
RPL28-202ENST00000426763 S100BP04271 92 aaPredicted RBP14.81□□□□□ -0.04
RPL28-202ENST00000426763 ZNF131P52739 623 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms