RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 NCANO14594 1321 aa8.12□□□□□ -1.11
SMARCC1-202ENST00000425518 C5orf60A6NFR6 353 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 CCT8L1PA6NM43 557 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 HGSO14964 777 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 PAEPP09466 180 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 VCAM1P19320 739 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 GPC5P78333 572 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 BFSP1Q12934 665 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 DHX34Q14147 1143 aaKnown RBP8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 NBPF9Q3BBW0 867 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 SEL1L2Q5TEA6 688 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 TTC27Q6P3X3 843 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 HHIPL2Q6UWX4 724 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 NSMFQ6X4W1 530 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 ARMC9Q7Z3E5 817 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 ARHGEF19Q8IW93 802 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 ZDHHC14Q8IZN3 488 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 CCT6BQ92526 530 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 ELMO3Q96BJ8 720 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 SGSM3Q96HU1 749 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 CRAMP1Q96RY5 1269 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 MTFR1LQ9H019 292 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 TMX4Q9H1E5 349 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 CXorf56Q9H5V9 222 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 SAMD15Q9P1V8 674 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 WRAP73Q9P2S5 460 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 SUGT1Q9Y2Z0 365 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 PHF2O75151 1096 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 CLTAP09496 248 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 PYGMP11217 842 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 CIITAP33076 1130 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 CETN1Q12798 172 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 SNX1Q13596 522 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 VPS72Q15906 364 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 C6orf118Q5T5N4 469 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 SH3BP5LQ7L8J4 393 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 RHOT2Q8IXI1 618 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 TCP11Q8WWU5 503 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 TBC1D31Q96DN5 1066 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 NACC1Q96RE7 527 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 POP1Q99575 1024 aaKnown RBP8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 MKNK1Q9BUB5 465 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 TXLNGYQ9BZA5 131 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 PRR12Q9ULL5 1215 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 TNRC6CQ9HCJ0 1690 aaKnown RBP8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 GOLGA8IPA6NC78 632 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 GOLGA8JA6NMD2 632 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 K7ENM7 598 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 RASGRF2O14827 1237 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 HIP1RO75146 1068 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 SGPL1O95470 568 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 ARP10275 920 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 HOXA10P31260 410 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 CHRNA3P32297 505 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 PTGIRP43119 386 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 JAG1P78504 1218 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 ZYXQ15942 572 aaKnown RBP8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 TMEM179Q6ZVK1 233 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 TBC1D1Q86TI0 1168 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 ZNF577Q9BSK1 485 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 SYT11Q9BT88 431 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 GRHL1Q9NZI5 618 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 FAM198AQ9UFP1 575 aa8.11□□□□□ -1.11
SMARCC1-202ENST00000425518 MYH4Q9Y623 1939 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 ANKRD63C9JTQ0 380 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 ACSL3O95573 720 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 NUDT17P0C025 328 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 NF2P35240 595 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 PRELPP51888 382 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 GSCP56915 257 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 PPP3CAQ08209 521 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 RBM26Q5T8P6 1007 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 PHLDB2Q86SQ0 1253 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 PPM1KQ8N3J5 372 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 ZSWIM2Q8NEG5 633 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 ZSWIM1Q9BR11 485 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 TAOK3Q9H2K8 898 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 TUFT1Q9NNX1 390 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 KCNK9Q9NPC2 374 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 TRPC6Q9Y210 931 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 RPTORQ8N122 1335 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 IGLV3-22A0A075B6J6 115 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 A0A1W2PRG0 241 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 FOXO6A8MYZ6 492 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 CYP26A1O43174 497 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 HSPA1LP34931 641 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 MMP13P45452 471 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 PPP2R5AQ15172 486 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 TRIP13Q15645 432 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 LONRF1Q17RB8 773 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 ANKRD42Q8N9B4 389 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 C1orf54Q8WWF1 131 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 CCDC127Q96BQ5 260 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 PGM2Q96G03 612 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 ZNF317Q96PQ6 595 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 FIZ1Q96SL8 496 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 PCDHB18PQ96TA0 734 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 CBWD1Q9BRT8 395 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 ADAM7Q9H2U9 754 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 DMAC2Q9NW81 257 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms