RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 PPFIA1Q13136 1202 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 DRAP1Q14919 205 aaPredicted RBP11.57□□□□□ -0.56
CUX1-205ENST00000425244 CBWD6Q4V339 395 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 CBWD3Q5JTY5 395 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 CBWD5Q5RIA9 395 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 ZNF720Q7Z2F6 126 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 SH2D3CQ8N5H7 860 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 LRRC57Q8N9N7 239 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 TXNRD2Q9NNW7 524 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 AGPAT3Q9NRZ7 376 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 ADAMTS5Q9UNA0 930 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 RRP15Q9Y3B9 282 aaKnown RBP11.57□□□□□ -0.56
CUX1-205ENST00000425244 LOC102724159A0A0B4J2E5 919 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 F8VZ95 297 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 IPO5O00410 1097 aaKnown RBP11.57□□□□□ -0.56
CUX1-205ENST00000425244 TRIM66O15016 1216 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 FDX1P10109 184 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 TNFRSF8P28908 595 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 PWP2Q15269 919 aaKnown RBP11.57□□□□□ -0.56
CUX1-205ENST00000425244 TTMPQ5BVD1 217 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 ALS2CLQ60I27 953 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 C10orf67Q8IYJ2 551 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 METTL13Q8N6R0 699 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 BORCS6Q96GS4 357 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 SH2D3AQ9BRG2 576 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 TEKT3Q9BXF9 490 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 ACAD9Q9H845 621 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 A1CFQ9NQ94 594 aaKnown RBP11.57□□□□□ -0.56
CUX1-205ENST00000425244 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.57□□□□□ -0.568e-7■■■■■ 154.8
CUX1-205ENST00000425244 KCNH4Q9UQ05 1017 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 FRMPD4Q14CM0 1322 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 CCL15-CCL14A0A0B4J2E2 113 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 BTNL10A8MVZ5 291 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 K7ENM7 598 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 HIP1RO75146 1068 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 RPS6KA5O75582 802 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 ITGB5P18084 799 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 SOX5P35711 763 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 GALCP54803 685 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 CCL15Q16663 113 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 LBX2Q6XYB7 198 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 STXBP4Q6ZWJ1 553 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 FASTKD5Q7L8L6 764 aaKnown RBP11.56□□□□□ -0.56
CUX1-205ENST00000425244 LNX1Q8TBB1 728 aaPredicted RBP11.56□□□□□ -0.56
CUX1-205ENST00000425244 INTS2Q9H0H0 1204 aaKnown RBP11.56□□□□□ -0.56
CUX1-205ENST00000425244 DDX47Q9H0S4 455 aaKnown RBP11.56□□□□□ -0.56
CUX1-205ENST00000425244 PCIF1Q9H4Z3 704 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 OSGEPQ9NPF4 335 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 FEZ2Q9UHY8 353 aaPredicted RBP11.56□□□□□ -0.56
CUX1-205ENST00000425244 NOC2LQ9Y3T9 749 aaKnown RBP11.56□□□□□ -0.56
CUX1-205ENST00000425244 SAMM50Q9Y512 469 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 MYO1CO00159 1063 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 PGRMC1O00264 195 aaKnown RBP11.56□□□□□ -0.56
CUX1-205ENST00000425244 KRIT1O00522 736 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 ATP1A2P50993 1020 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 GNGT1P63211 74 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 MYL7Q01449 175 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 CNTN2Q02246 1040 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 Q3C1V9 767 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 SRLQ86TD4 932 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 DDX42Q86XP3 938 aaKnown RBP eCLIP11.56□□□□□ -0.56
CUX1-205ENST00000425244 PBKQ96KB5 322 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 CAPS2Q9BXY5 557 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 SPATC1LQ9H0A9 340 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 PAPPA2Q9BXP8 1791 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 GTPBP10A4D1E9 387 aaKnown RBP11.56□□□□□ -0.56
CUX1-205ENST00000425244 TISP43B9A030 160 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 ITGA4P13612 1032 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 ERVK-9P63128 1117 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 MRPS9P82933 396 aaKnown RBP11.56□□□□□ -0.56
CUX1-205ENST00000425244 SP4Q02446 784 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 PPARDQ03181 441 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 PRPF4BQ13523 1007 aaKnown RBP11.56□□□□□ -0.56
CUX1-205ENST00000425244 MOGSQ13724 837 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 PGM5Q15124 567 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 GPAT2Q6NUI2 795 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 MAATS1Q7Z4T9 603 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 LMBR1Q8WVP7 490 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 FIZ1Q96SL8 496 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 SH3GL2Q99962 352 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 CENPHQ9H3R5 247 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 GPBP1L1Q9HC44 474 aaPredicted RBP11.56□□□□□ -0.56
CUX1-205ENST00000425244 PXMP2Q9NR77 195 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 CYP39A1Q9NYL5 469 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 FBXL5Q9UKA1 691 aa11.56□□□□□ -0.56
CUX1-205ENST00000425244 PDHXO00330 501 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 ITGBL1O95965 494 aaPredicted RBP11.55□□□□□ -0.56
CUX1-205ENST00000425244 OSBPP22059 807 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 IRAK1P51617 712 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 NNTQ13423 1086 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 NAA35Q5VZE5 725 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 PADI6Q6TGC4 694 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 MIER3Q7Z3K6 550 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 STK33Q9BYT3 514 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 KCNH7Q9NS40 1196 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.55□□□□□ -0.56
CUX1-205ENST00000425244 PPFIA4O75335 1185 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 PGK2P07205 417 aa11.55□□□□□ -0.56
CUX1-205ENST00000425244 ZNF157P51786 506 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms