RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 OFD1O75665 1012 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 GALTP07902 379 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 KRT2P35908 639 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 SLC11A1P49279 550 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 PTPN5P54829 565 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 CYP4A11Q02928 519 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 LAMTOR4Q0VGL1 99 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 XKR9Q5GH70 373 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 C4orf19Q8IY42 314 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 TDRD5Q8NAT2 981 aaKnown RBP18.03■□□□□ 0.48
COL18A1-205ENST00000423214 OXER1Q8TDS5 423 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 PRPF31Q8WWY3 499 aaKnown RBP18.03■□□□□ 0.48
COL18A1-205ENST00000423214 CCDC43Q96MW1 224 aaKnown RBP18.03■□□□□ 0.48
COL18A1-205ENST00000423214 MTRQ99707 1265 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 GJB4Q9NTQ9 266 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 ORC3Q9UBD5 711 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-205ENST00000423214 STK39Q9UEW8 545 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 TPCN1Q9ULQ1 816 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 MTMR3Q13615 1198 aa18.02■□□□□ 0.48
COL18A1-205ENST00000423214 KIAA1841Q6NSI8 718 aa18.02■□□□□ 0.48
COL18A1-205ENST00000423214 ZNF579Q8NAF0 562 aaKnown RBP18.02■□□□□ 0.48
COL18A1-205ENST00000423214 RNF149Q8NC42 400 aa18.02■□□□□ 0.48
COL18A1-205ENST00000423214 PRSS33Q8NF86 280 aa18.02■□□□□ 0.48
COL18A1-205ENST00000423214 BCL7CQ8WUZ0 217 aaPredicted RBP18.02■□□□□ 0.48
COL18A1-205ENST00000423214 HAS1Q92839 578 aa18.02■□□□□ 0.48
COL18A1-205ENST00000423214 DYDC2Q96IM9 177 aa18.02■□□□□ 0.48
COL18A1-205ENST00000423214 ZSWIM4Q9H7M6 989 aa18.02■□□□□ 0.48
COL18A1-205ENST00000423214 RGL1Q9NZL6 768 aa18.02■□□□□ 0.48
COL18A1-205ENST00000423214 IRAK3Q9Y616 596 aa18.02■□□□□ 0.48
COL18A1-205ENST00000423214 C2CD4DB7Z1M9 353 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 ASAP2O43150 1006 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 DTNBO60941 627 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 WEE2P0C1S8 567 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 EPCAMP16422 314 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 CTTNQ14247 550 aaKnown RBP18.01■□□□□ 0.47
COL18A1-205ENST00000423214 AGMOQ6ZNB7 445 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 CABP7Q86V35 215 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 PPFIBP1Q86W92 1011 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 KREMEN2Q8NCW0 462 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 ASIC4Q96FT7 647 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 EMILIN2Q9BXX0 1053 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 MINDY3Q9H8M7 445 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 KANSL3Q9P2N6 904 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 DBR1Q9UK59 544 aaKnown RBP18.01■□□□□ 0.47
COL18A1-205ENST00000423214 SORCS3Q9UPU3 1222 aa18.01■□□□□ 0.47
COL18A1-205ENST00000423214 SSBP05455 408 aaKnown RBP eCLIP18■□□□□ 0.47
COL18A1-205ENST00000423214 AK2P54819 239 aa18■□□□□ 0.47
COL18A1-205ENST00000423214 NR5A1Q13285 461 aa18■□□□□ 0.47
COL18A1-205ENST00000423214 TFDP1Q14186 410 aa18■□□□□ 0.47
COL18A1-205ENST00000423214 MXD4Q14582 209 aaPredicted RBP18■□□□□ 0.47
COL18A1-205ENST00000423214 PTPN14Q15678 1187 aa18■□□□□ 0.47
COL18A1-205ENST00000423214 FERMT3Q86UX7 667 aa18■□□□□ 0.47
COL18A1-205ENST00000423214 ZNF280BQ86YH2 543 aa18■□□□□ 0.47
COL18A1-205ENST00000423214 TPH2Q8IWU9 490 aa18■□□□□ 0.47
COL18A1-205ENST00000423214 C12orf76Q8N812 135 aaPredicted RBP18■□□□□ 0.47
COL18A1-205ENST00000423214 CNNM3Q8NE01 707 aa18■□□□□ 0.47
COL18A1-205ENST00000423214 TMEM175Q9BSA9 504 aa18■□□□□ 0.47
COL18A1-205ENST00000423214 SFXN1Q9H9B4 322 aa18■□□□□ 0.47
COL18A1-205ENST00000423214 FAM205CA6NFA0 338 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 B4GALT3O60512 393 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 CTDNEP1O95476 244 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 POMCP01189 267 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 ITGA4P13612 1032 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 ANAPC15P60006 121 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 SPIRE1Q08AE8 756 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 NCBP1Q09161 790 aaKnown RBP17.99■□□□□ 0.47
COL18A1-205ENST00000423214 CALCRLQ16602 461 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 EARS2Q5JPH6 523 aaKnown RBP17.99■□□□□ 0.47
COL18A1-205ENST00000423214 ATAT1Q5SQI0 421 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 IER5LQ5T953 404 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 NOTUMQ6P988 496 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 MRPL10Q7Z7H8 261 aaKnown RBP17.99■□□□□ 0.47
COL18A1-205ENST00000423214 UBALD2Q8IYN6 164 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 UBN1Q9NPG3 1134 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 FAN1Q9Y2M0 1017 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 CACNA1HO95180 2353 aa17.99■□□□□ 0.47
COL18A1-205ENST00000423214 INO80B-WBP1J3KQ70 363 aa17.98■□□□□ 0.47
COL18A1-205ENST00000423214 DDHD2O94830 711 aa17.98■□□□□ 0.47
COL18A1-205ENST00000423214 URODP06132 367 aa17.98■□□□□ 0.47
COL18A1-205ENST00000423214 NCLP19338 710 aaKnown RBP17.98■□□□□ 0.47
COL18A1-205ENST00000423214 KLRC2P26717 231 aa17.98■□□□□ 0.47
COL18A1-205ENST00000423214 AXLP30530 894 aa17.98■□□□□ 0.47
COL18A1-205ENST00000423214 VCPP55072 806 aaKnown RBP17.98■□□□□ 0.47
COL18A1-205ENST00000423214 TRIM29Q14134 588 aa17.98■□□□□ 0.47
COL18A1-205ENST00000423214 PCBP1Q15365 356 aaKnown RBP eCLIP17.98■□□□□ 0.47
COL18A1-205ENST00000423214 UBXN11Q5T124 520 aa17.98■□□□□ 0.47
COL18A1-205ENST00000423214 SLC22A17Q8WUG5 538 aa17.98■□□□□ 0.47
COL18A1-205ENST00000423214 CCDC51Q96ER9 411 aa17.98■□□□□ 0.47
COL18A1-205ENST00000423214 EIF2AK1Q9BQI3 630 aaKnown RBP17.98■□□□□ 0.47
COL18A1-205ENST00000423214 VN1R3Q9BXE9 311 aa17.98■□□□□ 0.47
COL18A1-205ENST00000423214 TRIM6Q9C030 488 aaPredicted RBP17.98■□□□□ 0.47
COL18A1-205ENST00000423214 MRPL17Q9NRX2 175 aaKnown RBP17.98■□□□□ 0.47
COL18A1-205ENST00000423214 PCDHA12Q9UN75 941 aa17.98■□□□□ 0.47
COL18A1-205ENST00000423214 DOCK8Q8NF50 2099 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 TRIP11Q15643 1979 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 NRP1O14786 923 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 NEMFO60524 1076 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 TSPAN1O60635 241 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 ALDH2P05091 517 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 HOXA11P31270 313 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms