RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 KLHL29Q96CT2 875 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 POLD4Q9HCU8 107 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 TTC7AQ9ULT0 858 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-205ENST00000418258 KDM6BO15054 1643 aa11.93□□□□□ -0.5
PTCH1-205ENST00000418258 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 ZSCAN9O15535 394 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-205ENST00000418258 MAP4P27816 1152 aaKnown RBP11.92□□□□□ -0.5
PTCH1-205ENST00000418258 TAF1CQ15572 869 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-205ENST00000418258 KDM4CQ9H3R0 1056 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 POTEB3A0JP26 581 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 POTECB2RU33 542 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 F5H6K3 240 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 KLRC3Q07444 240 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 MORF4L2Q15014 288 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 POTEBQ6S5H4 581 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 SH3TC2Q8TF17 1288 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 A0A0G2JLW4 131 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 FRMD3A2A2Y4 597 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 PIK3R2O00459 728 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 HMGCS2P54868 508 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 ADCY2Q08462 1091 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 KYAT1Q16773 422 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 MFN1Q8IWA4 741 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 FAM20AQ96MK3 541 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 KATNAL1Q9BW62 490 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 TRIM4Q9C037 500 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 DHX35Q9H5Z1 703 aaKnown RBP11.92□□□□□ -0.5
PTCH1-205ENST00000418258 OVOS2A0A0G2JMS6 1433 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 OVOS2A0A0J9YW53 1432 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 OVOS2Q6IE36 1432 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 PALMO75781 387 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 CHRNA5P30532 468 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 SMAD1Q15797 465 aaKnown RBP11.92□□□□□ -0.5
PTCH1-205ENST00000418258 ANKRD40Q6AI12 368 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 KDELC2Q7Z4H8 507 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 STRBPQ96SI9 672 aaKnown RBP11.92□□□□□ -0.5
PTCH1-205ENST00000418258 TSSK1BQ9BXA7 367 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 TXNP10599 105 aaKnown RBP11.92□□□□□ -0.5
PTCH1-205ENST00000418258 PFKFB3Q16875 520 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-205ENST00000418258 MORC4Q8TE76 937 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 CHAMP1Q96JM3 812 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 NEDD4P46934 1319 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 KPNA7A9QM74 516 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 C6orf222P0C671 652 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-205ENST00000418258 MAP2K2P36507 400 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 SMYD3Q9H7B4 428 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 TMEM260Q9NX78 707 aa11.92□□□□□ -0.5
PTCH1-205ENST00000418258 CCDC195A0A1B0GUA6 201 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 P4HBP07237 508 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 TFDP2Q14188 446 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 HIPK4Q8NE63 616 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 ASPSCR1Q9BZE9 553 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 KRT31Q15323 416 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 MEI1Q5TIA1 1274 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 WDR75Q8IWA0 830 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 TAGAPQ8N103 731 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 PROM2Q8N271 834 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 ZFYVE28Q9HCC9 887 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 ANGPTL2Q9UKU9 493 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 KRT7P08729 469 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 SPARCL1Q14515 664 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 ANKS3Q6ZW76 656 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 BRINP3Q76B58 766 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 SAMD9LQ8IVG5 1584 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 RAD54LQ92698 747 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 CYTH2Q99418 400 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 TRIM55Q9BYV6 548 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 AIPL1Q9NZN9 384 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 SELENONQ9NZV5 590 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 IP6K2Q9UHH9 426 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 CNOT7Q9UIV1 285 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 NOVA2Q9UNW9 492 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 APOBEC2Q9Y235 224 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 PCDHB7Q9Y5E2 793 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 CDC42BPBQ9Y5S2 1711 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 CTSHP09668 335 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 SETSIPP0DME0 302 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 IRF1P10914 325 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 PSMC5P62195 406 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 ROR1Q01973 937 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 CUL1Q13616 776 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 THOC1Q96FV9 657 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 EIF2AK1Q9BQI3 630 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 SLC9A2Q9UBY0 812 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 LSM7Q9UK45 103 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 A0A0G2JND7 137 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 SNAPC2Q13487 334 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 KNOP1Q1ED39 458 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 SDE2Q6IQ49 451 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 EPM2AIP1Q7L775 607 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 RRM2BQ7LG56 351 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 ZNF560Q96MR9 790 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 HERC5Q9UII4 1024 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 AGO2Q9UKV8 859 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 GTPBP10A4D1E9 387 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 SNAP23O00161 211 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 EIF3BP55884 814 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 CDK17Q00537 523 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 KCNH2Q12809 1159 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms