RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 TMEM161BQ8NDZ6 487 aa19.32■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 FIZ1Q96SL8 496 aa19.32■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 C7orf25Q9BPX7 421 aa19.32■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 TRIM9Q9C026 710 aa19.32■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ST6GALNAC4Q9H4F1 302 aa19.32■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 TMEM161AQ9NX61 479 aa19.32■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 SEL1LQ9UBV2 794 aa19.32■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 MSRAQ9UJ68 235 aa19.32■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 CNTNAP2Q9UHC6 1331 aa19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 GOLGA6L4A6NEF3 574 aa19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 SOX1O00570 391 aaPredicted RBP19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ACTN4O43707 911 aaKnown RBP19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 TRAK2O60296 914 aa19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 TBCAO75347 108 aaKnown RBP19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 PRKCBP05771 671 aa19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 GAP43P17677 238 aa19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ARF4P18085 180 aaPredicted RBP19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 NDUFA8P51970 172 aa19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 CACNB1Q02641 598 aaPredicted RBP19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 DYMQ7RTS9 669 aa19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ZNF598Q86UK7 904 aaKnown RBP19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ECHDC2Q86YB7 292 aa19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 CEP57L1Q8IYX8 460 aa19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 MYCT1Q8N699 235 aa19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 FSIP1Q8NA03 581 aa19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 SP7Q8TDD2 431 aaPredicted RBP19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 RSPH1Q8WYR4 309 aa19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ZNF689Q96CS4 500 aaPredicted RBP19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 RC3H2Q9HBD1 1191 aaKnown RBP19.31■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 SLC16A4O15374 487 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 TLL1O43897 1013 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 DGKIO75912 1065 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 MYL1P05976 194 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 FXR1P51114 621 aaKnown RBP eCLIP19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 LONRF3Q496Y0 759 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 UBXN11Q5T124 520 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 TWF2Q6IBS0 349 aaKnown RBP19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 TAS1R3Q7RTX0 852 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 MRPL10Q7Z7H8 261 aaKnown RBP19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 CNNM3Q8NE01 707 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ZBED2Q9BTP6 218 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 KIFC3Q9BVG8 833 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 OLFML3Q9NRN5 406 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 FAM105AQ9NUU6 356 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 SERTAD1Q9UHV2 236 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 PCDHB7Q9Y5E2 793 aa19.3■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 PTPRSQ13332 1948 aa19.29■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 DNAJB2P25686 324 aa19.29■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 PBX2P40425 430 aa19.29■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 RABGGTBP53611 331 aa19.29■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 GTF2BQ00403 316 aa19.29■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 PRPF4BQ13523 1007 aaKnown RBP19.29■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 HAUS6Q7Z4H7 955 aa19.29■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 TMCO2Q7Z6W1 182 aaPredicted RBP19.29■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 FAM178BQ8IXR5 827 aa19.29■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 GOLPH3LQ9H4A5 285 aa19.29■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 LRFN2Q9ULH4 789 aa19.29■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 COL4A6Q14031 1691 aa19.29■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 PVALEFA0A1B0GWK0 134 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 N4BP3O15049 544 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 B4GALT5O43286 388 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 HOXA2O43364 376 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 UPP2O95045 317 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ZNF202O95125 648 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 NT5DC1Q5TFE4 455 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 SLC27A1Q6PCB7 646 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ZNF720Q7Z2F6 126 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 CCDC65Q8IXS2 484 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ENGASEQ8NFI3 743 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 STAMQ92783 540 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 TIFAQ96CG3 184 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 PAGE5Q96GU1 130 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 STRA6Q9BX79 667 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 PANK4Q9NVE7 773 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 TNFSF13BQ9Y275 285 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 YBX2Q9Y2T7 364 aaKnown RBP19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 PCDHB2Q9Y5E7 798 aa19.28■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 EDN1P05305 212 aa19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ATF7P17544 494 aaPredicted RBP19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 STRN3Q13033 797 aa19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 SNW1Q13573 536 aaKnown RBP19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 HERC4Q5GLZ8 1057 aaPredicted RBP19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 KANK3Q6NY19 840 aa19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ZPBP2Q6X784 338 aa19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 KRBA2Q6ZNG9 492 aa19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 FMR1NBQ8N0W7 255 aaPredicted RBP19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 HVCN1Q96D96 273 aa19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 PGBD4Q96DM1 585 aa19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 LRCH3Q96II8 777 aa19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 CPB2Q96IY4 423 aa19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 YME1L1Q96TA2 773 aa19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 ACO2Q99798 780 aaKnown RBP19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 MRPL4Q9BYD3 311 aaKnown RBP19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 PTPRHQ9HD43 1115 aa19.27■□□□□ 0.68
COMMD3-BMI1-201ENST00000417470 MYH11P35749 1972 aa19.26■□□□□ 0.67
COMMD3-BMI1-201ENST00000417470 TTLL13PA6NNM8 815 aa19.26■□□□□ 0.67
COMMD3-BMI1-201ENST00000417470 PPP1R37O75864 691 aa19.26■□□□□ 0.67
COMMD3-BMI1-201ENST00000417470 PIGRP01833 764 aa19.26■□□□□ 0.67
COMMD3-BMI1-201ENST00000417470 IDEP14735 1019 aa19.26■□□□□ 0.67
COMMD3-BMI1-201ENST00000417470 FAM160A1Q05DH4 1040 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms