RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 SP8Q8IXZ3 490 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 LRRC47Q8N1G4 583 aaKnown RBP6.62□□□□□ -1.35
CSTF1-202ENST00000415828 LZTR1Q8N653 840 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 KCTD13Q8WZ19 329 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 DIO2Q92813 273 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 OPTNQ96CV9 577 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 SGSM3Q96HU1 749 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 DRC1Q96MC2 740 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 CCDC140Q96MF4 163 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 DEPDC7Q96QD5 511 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 MMP19Q99542 508 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 LBHD1Q9BQE6 289 aaPredicted RBP6.62□□□□□ -1.35
CSTF1-202ENST00000415828 CCDC113Q9H0I3 377 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 TNFRSF12AQ9NP84 129 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 MARCH2Q9P0N8 246 aa6.62□□□□□ -1.35
CSTF1-202ENST00000415828 TMEFF2Q9UIK5 374 aaPredicted RBP6.62□□□□□ -1.35
CSTF1-202ENST00000415828 DBR1Q9UK59 544 aaKnown RBP6.62□□□□□ -1.35
CSTF1-202ENST00000415828 CEP250Q9BV73 2442 aa6.61□□□□□ -1.35
CSTF1-202ENST00000415828 HEG1Q9ULI3 1381 aa6.61□□□□□ -1.35
CSTF1-202ENST00000415828 SASH1O94885 1247 aa6.61□□□□□ -1.35
CSTF1-202ENST00000415828 FUCA1P04066 466 aa6.61□□□□□ -1.35
CSTF1-202ENST00000415828 SSRP1Q08945 709 aaKnown RBP6.61□□□□□ -1.35
CSTF1-202ENST00000415828 SERINC3Q13530 473 aa6.61□□□□□ -1.35
CSTF1-202ENST00000415828 RASGRF1Q13972 1273 aa6.61□□□□□ -1.35
CSTF1-202ENST00000415828 IQCEQ6IPM2 695 aa6.61□□□□□ -1.35
CSTF1-202ENST00000415828 RPTNQ6XPR3 784 aa6.61□□□□□ -1.35
CSTF1-202ENST00000415828 MZB1Q8WU39 189 aa6.61□□□□□ -1.35
CSTF1-202ENST00000415828 SPATA9Q9BWV2 254 aa6.61□□□□□ -1.35
CSTF1-202ENST00000415828 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.61□□□□□ -1.35
CSTF1-202ENST00000415828 RXFP1Q9HBX9 757 aa6.61□□□□□ -1.35
CSTF1-202ENST00000415828 ARHGEF4Q9NR80 690 aa6.61□□□□□ -1.35
CSTF1-202ENST00000415828 TRAV20A0A0B4J274 112 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 FAM221BA6H8Z2 402 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 F8W031 263 aaPredicted RBP6.6□□□□□ -1.35
CSTF1-202ENST00000415828 WNT10BO00744 389 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 MYO1BO43795 1136 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 PPP1R11O60927 126 aaPredicted RBP6.6□□□□□ -1.35
CSTF1-202ENST00000415828 SCG5P05408 212 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 HOXA5P20719 270 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 TMEM62Q0P6H9 643 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 KCNAB2Q13303 367 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 E4F1Q66K89 784 aaPredicted RBP6.6□□□□□ -1.35
CSTF1-202ENST00000415828 NSMFQ6X4W1 530 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 USP53Q70EK8 1073 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 CCDC103Q8IW40 242 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 TEX2Q8IWB9 1127 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 KREMEN2Q8NCW0 462 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 CHAMP1Q96JM3 812 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 TMX4Q9H1E5 349 aaPredicted RBP6.6□□□□□ -1.35
CSTF1-202ENST00000415828 ZCCHC4Q9H5U6 513 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 EPB41L4AQ9HCS5 686 aaPredicted RBP6.6□□□□□ -1.35
CSTF1-202ENST00000415828 PARD6AQ9NPB6 346 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 SNTG2Q9NY99 539 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 FBLN5Q9UBX5 448 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 POLLQ9UGP5 575 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 ZNF652Q9Y2D9 606 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 PTPRFP10586 1907 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 COL1A1P02452 1464 aaPredicted RBP6.6□□□□□ -1.35
CSTF1-202ENST00000415828 SPEF2Q9C093 1822 aa6.6□□□□□ -1.35
CSTF1-202ENST00000415828 ARAP2Q8WZ64 1704 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 UBN2Q6ZU65 1347 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 USP9XQ93008 2570 aaPredicted RBP6.59□□□□□ -1.35
CSTF1-202ENST00000415828 ZC3H12DA2A288 527 aaKnown RBP6.59□□□□□ -1.35
CSTF1-202ENST00000415828 BTBD19C9JJ37 291 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 RNMTO43148 476 aaKnown RBP6.59□□□□□ -1.35
CSTF1-202ENST00000415828 DIAPH1O60610 1272 aaKnown RBP6.59□□□□□ -1.35
CSTF1-202ENST00000415828 CYBBP04839 570 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 DBHP09172 617 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 U2AF1L5P0DN76 240 aaPredicted RBP6.59□□□□□ -1.35
CSTF1-202ENST00000415828 PABPC1P11940 636 aaKnown RBP6.59□□□□□ -1.35
CSTF1-202ENST00000415828 COL6A1P12109 1028 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 HOXD10P28358 340 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 FLT3LGP49771 235 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 NCKAP1LP55160 1127 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 RPL11P62913 178 aaKnown RBP6.59□□□□□ -1.35
CSTF1-202ENST00000415828 U2AF1Q01081 240 aaKnown RBP eCLIP6.59□□□□□ -1.35
CSTF1-202ENST00000415828 MAP4K2Q12851 820 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 TCF15Q12870 199 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 RASA3Q14644 834 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 YOD1Q5VVQ6 348 aaPredicted RBP6.59□□□□□ -1.35
CSTF1-202ENST00000415828 DENND5AQ6IQ26 1287 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 PAQR3Q6TCH7 311 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 TMEM151BQ8IW70 566 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 TMEFF1Q8IYR6 380 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 DACT3Q96B18 629 aaPredicted RBP6.59□□□□□ -1.35
CSTF1-202ENST00000415828 MXD3Q9BW11 206 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 OSBPL2Q9H1P3 480 aa6.59□□□□□ -1.35
CSTF1-202ENST00000415828 TIMM13Q9Y5L4 95 aaPredicted RBP6.59□□□□□ -1.35
CSTF1-202ENST00000415828 ARNTLO00327 626 aa6.58□□□□□ -1.36
CSTF1-202ENST00000415828 IRS4O14654 1257 aaPredicted RBP6.58□□□□□ -1.36
CSTF1-202ENST00000415828 DLX3O60479 287 aa6.58□□□□□ -1.36
CSTF1-202ENST00000415828 LCP1P13796 627 aa6.58□□□□□ -1.36
CSTF1-202ENST00000415828 LTBRP36941 435 aa6.58□□□□□ -1.36
CSTF1-202ENST00000415828 BCL6P41182 706 aa6.58□□□□□ -1.36
CSTF1-202ENST00000415828 AFF3P51826 1226 aaKnown RBP6.58□□□□□ -1.36
CSTF1-202ENST00000415828 EPHB4P54760 987 aa6.58□□□□□ -1.36
CSTF1-202ENST00000415828 CTSWP56202 376 aa6.58□□□□□ -1.36
CSTF1-202ENST00000415828 BMS1Q14692 1282 aaKnown RBP6.58□□□□□ -1.36
CSTF1-202ENST00000415828 CBX2Q14781 532 aaPredicted RBP6.58□□□□□ -1.36
CSTF1-202ENST00000415828 NR1I3Q14994 352 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms