RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 PALB2Q86YC2 1186 aa13.39□□□□□ -0.27
UBA3-203ENST00000415609 PLEKHO2Q8TD55 490 aa13.39□□□□□ -0.27
UBA3-203ENST00000415609 SLC20A1Q8WUM9 679 aa13.39□□□□□ -0.27
UBA3-203ENST00000415609 GPRASP2Q96D09 838 aa13.39□□□□□ -0.27
UBA3-203ENST00000415609 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.39□□□□□ -0.27
UBA3-203ENST00000415609 TAS2R14Q9NYV8 317 aa13.39□□□□□ -0.27
UBA3-203ENST00000415609 FZD1Q9UP38 647 aa13.39□□□□□ -0.27
UBA3-203ENST00000415609 PCDHA10Q9Y5I2 948 aa13.39□□□□□ -0.27
UBA3-203ENST00000415609 COL11A1P12107 1806 aaPredicted RBP13.38□□□□□ -0.27
UBA3-203ENST00000415609 PHIPQ8WWQ0 1821 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 GOLGA6CA6NDK9 693 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 KRIT1O00522 736 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 MAPK13O15264 365 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 GOLGA6DP0CG33 693 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 PTPRAP18433 802 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 NPTX2P47972 431 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 GUCY2FP51841 1108 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 SNRNP35Q16560 246 aaKnown RBP13.38□□□□□ -0.27
UBA3-203ENST00000415609 TAF3Q5VWG9 929 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 PRAMEF18Q5VWM3 479 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 ALS2CLQ60I27 953 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 ANO5Q75V66 913 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 VSIG10LQ86VR7 867 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 RDM1Q8NG50 284 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 SCFD2Q8WU76 684 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 VTI1AQ96AJ9 217 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 ARHGEF26Q96DR7 871 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 SAAL1Q96ER3 474 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 HES6Q96HZ4 224 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 CALR3Q96L12 384 aaKnown RBP13.38□□□□□ -0.27
UBA3-203ENST00000415609 TMEM117Q9H0C3 514 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 THAP2Q9H0W7 228 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 KMT5AQ9NQR1 393 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 GOLGA6AQ9NYA3 693 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 GABBR1Q9UBS5 961 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 TBX20Q9UMR3 447 aa13.38□□□□□ -0.27
UBA3-203ENST00000415609 BRCA1P38398 1863 aaKnown RBP13.38□□□□□ -0.27
UBA3-203ENST00000415609 DENND3A2RUS2 1198 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 ANKRD63C9JTQ0 380 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 OPA1O60313 960 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 FAM153BP0C7A2 387 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 ZBTB48P10074 688 aaPredicted RBP13.37□□□□□ -0.27
UBA3-203ENST00000415609 ACTN2P35609 894 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 SP4Q02446 784 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 MAP2K1Q02750 393 aaPredicted RBP13.37□□□□□ -0.27
UBA3-203ENST00000415609 FAM153CQ494X1 144 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.37□□□□□ -0.27
UBA3-203ENST00000415609 OTUD6AQ7L8S5 288 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 CBWD2Q8IUF1 395 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 TMEM161BQ8NDZ6 487 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 FAM76AQ8TAV0 307 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 ATP6V0A1Q93050 837 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 CCDC127Q96BQ5 260 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 CEP170P1Q96L14 293 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 FAM153AQ9UHL3 310 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 ANKRD62A6NC57 917 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 SOX10P56693 466 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 ANGEL2Q5VTE6 544 aaKnown RBP13.37□□□□□ -0.27
UBA3-203ENST00000415609 MAP4K3Q8IVH8 894 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 RPUSD2Q8IZ73 545 aaKnown RBP13.37□□□□□ -0.27
UBA3-203ENST00000415609 RASGEF1CQ8N431 466 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 REPS2Q8NFH8 660 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 NSUN6Q8TEA1 469 aaKnown RBP13.37□□□□□ -0.27
UBA3-203ENST00000415609 KIFAP3Q92845 792 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 KAT5Q92993 513 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 HVCN1Q96D96 273 aa13.37□□□□□ -0.27
UBA3-203ENST00000415609 DDX47Q9H0S4 455 aaKnown RBP13.37□□□□□ -0.27
UBA3-203ENST00000415609 GOLGA8KD6RF30 607 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 CCDC188H7C350 402 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 SORBS3O60504 671 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 CNGA1P29973 690 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 ADSSP30520 456 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 DSG3P32926 999 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 OAZ1P54368 228 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 PPATQ06203 517 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 HLTFQ14527 1009 aaKnown RBP eCLIP13.36□□□□□ -0.27
UBA3-203ENST00000415609 TRADDQ15628 312 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 PPM1KQ8N3J5 372 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 WHAMMQ8TF30 809 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 BSNDQ8WZ55 320 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 SENP7Q9BQF6 1050 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 SEPT9Q9UHD8 586 aaPredicted RBP13.36□□□□□ -0.27
UBA3-203ENST00000415609 ZNF112Q9UJU3 913 aa13.36□□□□□ -0.27
UBA3-203ENST00000415609 MAFGO15525 162 aa13.35□□□□□ -0.27
UBA3-203ENST00000415609 SART1O43290 800 aaKnown RBP13.35□□□□□ -0.27
UBA3-203ENST00000415609 ZNF862O60290 1169 aa13.35□□□□□ -0.27
UBA3-203ENST00000415609 DKC1O60832 514 aaKnown RBP eCLIP13.35□□□□□ -0.27
UBA3-203ENST00000415609 PSAPP07602 524 aa13.35□□□□□ -0.27
UBA3-203ENST00000415609 ITGA4P13612 1032 aa13.35□□□□□ -0.27
UBA3-203ENST00000415609 KCNA2P16389 499 aa13.35□□□□□ -0.27
UBA3-203ENST00000415609 ERVK-9P63128 1117 aa13.35□□□□□ -0.27
UBA3-203ENST00000415609 PPFIA1Q13136 1202 aa13.35□□□□□ -0.27
UBA3-203ENST00000415609 TMEM132BQ14DG7 1078 aa13.35□□□□□ -0.27
UBA3-203ENST00000415609 CFAP58Q5T655 872 aa13.35□□□□□ -0.27
UBA3-203ENST00000415609 SWSAP1Q6NVH7 229 aa13.35□□□□□ -0.27
UBA3-203ENST00000415609 ZIM3Q96PE6 472 aa13.35□□□□□ -0.27
UBA3-203ENST00000415609 SH3GL2Q99962 352 aa13.35□□□□□ -0.27
UBA3-203ENST00000415609 TAF1DQ9H5J8 278 aaPredicted RBP13.35□□□□□ -0.27
UBA3-203ENST00000415609 JPH1Q9HDC5 661 aaPredicted RBP13.35□□□□□ -0.27
UBA3-203ENST00000415609 CTTNBP2NLQ9P2B4 639 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms