RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 ASAP3Q8TDY4 903 aa18.68■□□□□ 0.58
COL6A2-205ENST00000413758 CPB2Q96IY4 423 aa18.68■□□□□ 0.58
COL6A2-205ENST00000413758 LRFN3Q9BTN0 628 aa18.68■□□□□ 0.58
COL6A2-205ENST00000413758 NRDE2Q9H7Z3 1164 aa18.68■□□□□ 0.58
COL6A2-205ENST00000413758 RSAD1Q9HA92 442 aa18.68■□□□□ 0.58
COL6A2-205ENST00000413758 TUFT1Q9NNX1 390 aa18.68■□□□□ 0.58
COL6A2-205ENST00000413758 USP15Q9Y4E8 981 aaPredicted RBP18.68■□□□□ 0.58
COL6A2-205ENST00000413758 CARNS1A5YM72 827 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 DCXO43602 365 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 ST18O60284 1047 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 TSPAN1O60635 241 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 EYA4O95677 639 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 CXCL14O95715 111 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 XRCC6P12956 609 aaKnown RBP eCLIP18.67■□□□□ 0.58
COL6A2-205ENST00000413758 ITGA4P13612 1032 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 AXLP30530 894 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 HOXA11P31270 313 aaPredicted RBP18.67■□□□□ 0.58
COL6A2-205ENST00000413758 ORC2Q13416 577 aaPredicted RBP18.67■□□□□ 0.58
COL6A2-205ENST00000413758 CAPSQ13938 189 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 RABEP1Q15276 862 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 NOTUMQ6P988 496 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 AGMOQ6ZNB7 445 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 MRPL10Q7Z7H8 261 aaKnown RBP18.67■□□□□ 0.58
COL6A2-205ENST00000413758 CATSPER3Q86XQ3 398 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 VPS52Q8N1B4 723 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 CNNM3Q8NE01 707 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 VN1R2Q8NFZ6 395 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 NACC1Q96RE7 527 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 APOL6Q9BWW8 343 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 APOL5Q9BWW9 433 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 TRIM6Q9C030 488 aaPredicted RBP18.67■□□□□ 0.58
COL6A2-205ENST00000413758 UPF2Q9HAU5 1272 aaKnown RBP18.67■□□□□ 0.58
COL6A2-205ENST00000413758 CNTNAP2Q9UHC6 1331 aa18.67■□□□□ 0.58
COL6A2-205ENST00000413758 LRRIQ4A6NIV6 560 aa18.66■□□□□ 0.58
COL6A2-205ENST00000413758 C19orf67A6NJJ6 358 aa18.66■□□□□ 0.58
COL6A2-205ENST00000413758 MED24O75448 989 aa18.66■□□□□ 0.58
COL6A2-205ENST00000413758 POMCP01189 267 aa18.66■□□□□ 0.58
COL6A2-205ENST00000413758 GALTP07902 379 aa18.66■□□□□ 0.58
COL6A2-205ENST00000413758 SPATA31C1P0DKV0 1188 aa18.66■□□□□ 0.58
COL6A2-205ENST00000413758 ARL2P36404 184 aa18.66■□□□□ 0.58
COL6A2-205ENST00000413758 PCBP1Q15365 356 aaKnown RBP eCLIP18.66■□□□□ 0.58
COL6A2-205ENST00000413758 TMEM132AQ24JP5 1023 aa18.66■□□□□ 0.58
COL6A2-205ENST00000413758 UBXN11Q5T124 520 aa18.66■□□□□ 0.58
COL6A2-205ENST00000413758 MRPL43Q8N983 215 aaKnown RBP18.66■□□□□ 0.58
COL6A2-205ENST00000413758 POLR3CQ9BUI4 534 aaPredicted RBP18.66■□□□□ 0.58
COL6A2-205ENST00000413758 KANSL3Q9P2N6 904 aa18.66■□□□□ 0.58
COL6A2-205ENST00000413758 DNAJB4Q9UDY4 337 aa18.66■□□□□ 0.58
COL6A2-205ENST00000413758 KIF3AQ9Y496 699 aa18.66■□□□□ 0.58
COL6A2-205ENST00000413758 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.65■□□□□ 0.58
COL6A2-205ENST00000413758 ARHGEF35A5YM69 484 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 C2orf71A6NGG8 1288 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 GPR37L1O60883 481 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 NCLP19338 710 aaKnown RBP18.65■□□□□ 0.58
COL6A2-205ENST00000413758 GLRA2P23416 452 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 SLC11A1P49279 550 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 MCTP1Q6DN14 999 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 ANKRD54Q6NXT1 300 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 POTEGQ6S5H5 508 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 ZNF280BQ86YH2 543 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 HACE1Q8IYU2 909 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 MCPH1Q8NEM0 835 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 AUTS2Q8WXX7 1259 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 CASP10Q92851 521 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 CCDC51Q96ER9 411 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 IGSF21Q96ID5 467 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 EIF2AQ9BY44 585 aaKnown RBP18.65■□□□□ 0.58
COL6A2-205ENST00000413758 CSRNP2Q9H175 543 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 UBN1Q9NPG3 1134 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 GPRC5CQ9NQ84 441 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 DBR1Q9UK59 544 aaKnown RBP18.65■□□□□ 0.58
COL6A2-205ENST00000413758 IPPQ9Y573 584 aa18.65■□□□□ 0.58
COL6A2-205ENST00000413758 ALDH2P05091 517 aa18.64■□□□□ 0.57
COL6A2-205ENST00000413758 CCT6AP40227 531 aaKnown RBP18.64■□□□□ 0.57
COL6A2-205ENST00000413758 TRAPPC10P48553 1259 aa18.64■□□□□ 0.57
COL6A2-205ENST00000413758 MBTD1Q05BQ5 628 aa18.64■□□□□ 0.57
COL6A2-205ENST00000413758 POU5F1BQ06416 359 aa18.64■□□□□ 0.57
COL6A2-205ENST00000413758 NBR1Q14596 966 aa18.64■□□□□ 0.57
COL6A2-205ENST00000413758 HAUS3Q68CZ6 603 aa18.64■□□□□ 0.57
COL6A2-205ENST00000413758 DDX53Q86TM3 631 aaKnown RBP18.64■□□□□ 0.57
COL6A2-205ENST00000413758 TMEM173Q86WV6 379 aaPredicted RBP18.64■□□□□ 0.57
COL6A2-205ENST00000413758 ZBTB8OSQ8IWT0 167 aa18.64■□□□□ 0.57
COL6A2-205ENST00000413758 SMG8Q8ND04 991 aaKnown RBP18.64■□□□□ 0.57
COL6A2-205ENST00000413758 RPGRIP1Q96KN7 1286 aa18.64■□□□□ 0.57
COL6A2-205ENST00000413758 FAN1Q9Y2M0 1017 aa18.64■□□□□ 0.57
COL6A2-205ENST00000413758 HCN4Q9Y3Q4 1203 aa18.64■□□□□ 0.57
COL6A2-205ENST00000413758 HES2Q9Y543 173 aa18.64■□□□□ 0.57
COL6A2-205ENST00000413758 MUC3AQ02505 3323 aa18.64■□□□□ 0.57
COL6A2-205ENST00000413758 CLASP2O75122 1294 aaKnown RBP18.63■□□□□ 0.57
COL6A2-205ENST00000413758 DDHD2O94830 711 aa18.63■□□□□ 0.57
COL6A2-205ENST00000413758 NPTXRO95502 500 aa18.63■□□□□ 0.57
COL6A2-205ENST00000413758 SSBP05455 408 aaKnown RBP eCLIP18.63■□□□□ 0.57
COL6A2-205ENST00000413758 ARF4P18085 180 aaPredicted RBP18.63■□□□□ 0.57
COL6A2-205ENST00000413758 LIG1P18858 919 aa18.63■□□□□ 0.57
COL6A2-205ENST00000413758 RPA1P27694 616 aa18.63■□□□□ 0.57
COL6A2-205ENST00000413758 AFF1P51825 1210 aaKnown RBP18.63■□□□□ 0.57
COL6A2-205ENST00000413758 TPRNQ4KMQ1 711 aa18.63■□□□□ 0.57
COL6A2-205ENST00000413758 PADI6Q6TGC4 694 aa18.63■□□□□ 0.57
COL6A2-205ENST00000413758 IFNLR1Q8IU57 520 aaPredicted RBP18.63■□□□□ 0.57
COL6A2-205ENST00000413758 RNF135Q8IUD6 432 aa18.63■□□□□ 0.57
COL6A2-205ENST00000413758 BCL7CQ8WUZ0 217 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms