RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 GPRC5CQ9NQ84 441 aa9.07□□□□□ -0.96
RPE-204ENST00000411934 OLFML3Q9NRN5 406 aa9.07□□□□□ -0.96
RPE-204ENST00000411934 KBTBD4Q9NVX7 518 aa9.07□□□□□ -0.96
RPE-204ENST00000411934 PIN4Q9Y237 131 aaKnown RBP9.07□□□□□ -0.96
RPE-204ENST00000411934 TCHHQ07283 1943 aa9.07□□□□□ -0.96
RPE-204ENST00000411934 A0A1B0GUA9 196 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 FRMD3A2A2Y4 597 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 SOX1O00570 391 aaPredicted RBP9.06□□□□□ -0.96
RPE-204ENST00000411934 ACKR2O00590 384 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 MGEA5O60502 916 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 TSPAN1O60635 241 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 DGKIO75912 1065 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 FAM13AO94988 1023 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 SSBP05455 408 aaKnown RBP eCLIP9.06□□□□□ -0.96
RPE-204ENST00000411934 PRKCBP05771 671 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 HOXA11P31270 313 aaPredicted RBP9.06□□□□□ -0.96
RPE-204ENST00000411934 NPTX2P47972 431 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 GIT2Q14161 759 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 MCM6Q14566 821 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 DCAF4L1Q3SXM0 396 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 ARSHQ5FYA8 562 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 SPECC1Q5M775 1068 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 TWF2Q6IBS0 349 aaKnown RBP9.06□□□□□ -0.96
RPE-204ENST00000411934 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.06□□□□□ -0.96
RPE-204ENST00000411934 RTN4RL1Q86UN2 441 aaPredicted RBP9.06□□□□□ -0.96
RPE-204ENST00000411934 ECHDC2Q86YB7 292 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 LRRC15Q8TF66 581 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 BSNDQ8WZ55 320 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 PGBD4Q96DM1 585 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 YME1L1Q96TA2 773 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 ADPGKQ9BRR6 497 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 ZBED2Q9BTP6 218 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 MRPL9Q9BYD2 267 aaKnown RBP9.06□□□□□ -0.96
RPE-204ENST00000411934 TMEM117Q9H0C3 514 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 MINDY3Q9H8M7 445 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 SLC28A3Q9HAS3 691 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 UBN1Q9NPG3 1134 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 KMT5AQ9NQR1 393 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 FAM105AQ9NUU6 356 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 LRFN2Q9ULH4 789 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 HPSEQ9Y251 543 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 PCDHB7Q9Y5E2 793 aa9.06□□□□□ -0.96
RPE-204ENST00000411934 A0A087WWV3 80 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 A0A087X0B3 334 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 K7ERI5 159 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 INPPL1O15357 1258 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 KRT18P05783 430 aaKnown RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 ARF4P18085 180 aaPredicted RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 PEX3P56589 373 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 PRPF4BQ13523 1007 aaKnown RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 FOXD4L6Q3SYB3 417 aaPredicted RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 PPP2R2DQ66LE6 453 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 SLC27A1Q6PCB7 646 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 FOXD4L3Q6VB84 417 aaPredicted RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 CLEC17AQ6ZS10 378 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 MAEAQ7L5Y9 396 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 MRPL10Q7Z7H8 261 aaKnown RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 ZNF598Q86UK7 904 aaKnown RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 TMEM87AQ8NBN3 555 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 TMEM161BQ8NDZ6 487 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 MRPS27Q92552 414 aaKnown RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 DDX12PQ92771 950 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 CLP1Q92989 425 aaKnown RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 DNAJC19Q96DA6 116 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 ZNF668Q96K58 619 aaPredicted RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 PLIN2Q99541 437 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 MRPL4Q9BYD3 311 aaKnown RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 KCNH3Q9ULD8 1083 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 TNFSF13BQ9Y275 285 aa9.05□□□□□ -0.96
RPE-204ENST00000411934 YBX2Q9Y2T7 364 aaKnown RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.05□□□□□ -0.96
RPE-204ENST00000411934 PVALEFA0A1B0GWK0 134 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 LINC01553A4QN01 128 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 CCDC169A6NNP5 214 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 C5orf67F2Z3F1 127 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 POLR2DO15514 142 aaKnown RBP9.04□□□□□ -0.96
RPE-204ENST00000411934 TRAK2O60296 914 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 PIGRP01833 764 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 RB1P06400 928 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 CA3P07451 260 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 SLFN14P0C7P3 912 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 PFKFB1P16118 471 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 ATF7P17544 494 aaPredicted RBP9.04□□□□□ -0.96
RPE-204ENST00000411934 FGFR4P22455 802 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 ERVK-21P61565 698 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 GTF2BQ00403 316 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 STRN3Q13033 797 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 KANK3Q6NY19 840 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 ZPBP2Q6X784 338 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 STXBP4Q6ZWJ1 553 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 MAP4K3Q8IVH8 894 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 FAM178BQ8IXR5 827 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 CCDC65Q8IXS2 484 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 CEP57L1Q8IYX8 460 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 LRRC43Q8N309 656 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 PDILTQ8N807 584 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 DHX58Q96C10 678 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 LRCH3Q96II8 777 aa9.04□□□□□ -0.96
RPE-204ENST00000411934 IPO9Q96P70 1041 aaKnown RBP9.04□□□□□ -0.96
RPE-204ENST00000411934 TGS1Q96RS0 853 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms