RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 FAM83BQ5T0W9 1011 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 TAB3Q8N5C8 712 aaPredicted RBP8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 BANK1Q8NDB2 785 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 TGS1Q96RS0 853 aaKnown RBP8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 C7orf25Q9BPX7 421 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 FTOQ9C0B1 505 aaKnown RBP eCLIP8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 PITPNM2Q9BZ72 1349 aa8.89□□□□□ -0.99
SPTLC3-201ENST00000399002 MYO1DO94832 1006 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 ACSL3O95573 720 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 RPSAP08865 295 aaKnown RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 ARFIP2P53365 341 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 ABCE1P61221 599 aaKnown RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 GFPT1Q06210 699 aaPredicted RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 SF3A3Q12874 501 aaKnown RBP eCLIP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 SYN2Q92777 582 aaPredicted RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 FGD4Q96M96 766 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 WWP1Q9H0M0 922 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 UBN2Q6ZU65 1347 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 ZNF335Q9H4Z2 1342 aaPredicted RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 PHF2O75151 1096 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 NLRP11P59045 1033 aaKnown RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 HEATR6Q6AI08 1181 aaKnown RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 OR9Q1Q8NGQ5 310 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 PPARGC1AQ9UBK2 798 aaKnown RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 SSU72P8A0A1W2PR75 194 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 P4HA2O15460 535 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 HNRNPRO43390 633 aaKnown RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 MAP3K10Q02779 954 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 TTLL4Q14679 1199 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 RARS2Q5T160 578 aaKnown RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 ICA1LQ8NDH6 482 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 DDX17Q92841 729 aaKnown RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 DYDC2Q96IM9 177 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 ASPSCR1Q9BZE9 553 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 ADAMTS1Q9UHI8 967 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 HERC5Q9UII4 1024 aaKnown RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 GDAQ9Y2T3 454 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 HNRNPCL2B2RXH8 293 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 EFCAB14O75071 495 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 NOP14P78316 857 aaKnown RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 DNAL1Q4LDG9 190 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 BEND6Q5SZJ8 279 aaPredicted RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 ENAHQ8N8S7 591 aaPredicted RBP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 AGPAT1Q99943 283 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 TRPA1O75762 1119 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 ELF1P32519 619 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 AARSP49588 968 aaKnown RBP eCLIP8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 C1orf146Q5VVC0 180 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 KIAA1841Q6NSI8 718 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 SCARA5Q6ZMJ2 495 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 ZNF677Q86XU0 584 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 PIGBQ92521 554 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 TSPAN17Q96FV3 270 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 ISCA1Q9BUE6 129 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 PTPRUQ92729 1446 aa8.88□□□□□ -0.99
SPTLC3-201ENST00000399002 CFAP69A5D8W1 941 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 STXBP3O00186 592 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 E2F5Q15329 346 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 ZNF568Q3ZCX4 644 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 SBK1Q52WX2 424 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 TMCO5AQ8N6Q1 288 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 C7orf31Q8N865 590 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 PPHLN1Q8NEY8 458 aaKnown RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 SNX19Q92543 992 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 TTC17Q96AE7 1141 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 ROPN1BQ9BZX4 212 aaPredicted RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 ROPN1Q9HAT0 212 aaPredicted RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 GPBP1L1Q9HC44 474 aaPredicted RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 SPATA31A3Q5VYP0 1347 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 SPDYE2BA6NHP3 402 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 SPDYE6P0CI01 402 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 MAGOHP61326 146 aaKnown RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 MORF4L2Q15014 288 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 TMTC4Q5T4D3 741 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 CATSPER4Q7RTX7 472 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 CCSER1Q9C0I3 900 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 POLR3FQ9H1D9 316 aaPredicted RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 LMCD1Q9NZU5 365 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 ADAM21Q9UKJ8 722 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 PRR36Q9H6K5 1346 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 A0A0G2JND7 137 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 A0A1B0GTH6 734 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 M0QYV0 167 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 TNPO2O14787 897 aaKnown RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 ATP1A3P13637 1013 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 CENPCQ03188 943 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 DRAP1Q14919 205 aaPredicted RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 GRAMD1BQ3KR37 738 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 KRT27Q7Z3Y8 459 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 PBXIP1Q96AQ6 731 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 STAMBPL1Q96FJ0 436 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 DBNDD1Q9H9R9 158 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 PCDHB8Q9UN66 801 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 BCORL1Q5H9F3 1711 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 ASB14A6NK59 587 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 APOA4P06727 396 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 MYL3P08590 195 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 ITIH2P19823 946 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 SERPINB10P48595 397 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms