RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SETD4Q9NVD3 440 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 ARHGAP28Q9P2N2 729 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 PTCH2Q9Y6C5 1203 aa21.15■□□□□ 0.98
PDLIM2-204ENST00000397760 LRRC10BA6NIK2 292 aa21.14■□□□□ 0.97
PDLIM2-204ENST00000397760 ZEB2O60315 1214 aa21.14■□□□□ 0.97
PDLIM2-204ENST00000397760 SMIM10L2AP0DMW4 78 aa21.14■□□□□ 0.97
PDLIM2-204ENST00000397760 SMIM10L2BP0DMW5 78 aa21.14■□□□□ 0.97
PDLIM2-204ENST00000397760 NR2F2P24468 414 aa21.14■□□□□ 0.97
PDLIM2-204ENST00000397760 CAPSQ13938 189 aa21.14■□□□□ 0.97
PDLIM2-204ENST00000397760 ZC3H3Q8IXZ2 948 aaKnown RBP21.14■□□□□ 0.97
PDLIM2-204ENST00000397760 KRT222Q8N1A0 295 aa21.14■□□□□ 0.97
PDLIM2-204ENST00000397760 CNOT6LQ96LI5 555 aaKnown RBP21.14■□□□□ 0.97
PDLIM2-204ENST00000397760 DDX20Q9UHI6 824 aaKnown RBP21.14■□□□□ 0.97
PDLIM2-204ENST00000397760 MYH11P35749 1972 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 CETN3O15182 167 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 CLIC2O15247 247 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 ADAMTS4O75173 837 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 FECHP22830 423 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 ABCD1P33897 745 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 LAMTOR4Q0VGL1 99 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 MARCH8Q5T0T0 291 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 PPFIBP1Q86W92 1011 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 GOLGA5Q8TBA6 731 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 AGPAT3Q9NRZ7 376 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 EXOC7Q9UPT5 735 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 NRCAMQ92823 1304 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 NR3C1P04150 777 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 RPL13P26373 211 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 TMOD1P28289 359 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 FAM193AP78312 1265 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 RHPN2Q8IUC4 686 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 MAP4K3Q8IVH8 894 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 LINC01465Q8N7H1 131 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 DNAJC5GQ8N7S2 189 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 MNS1Q8NEH6 495 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 PPP1R13LQ8WUF5 828 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 UBXN4Q92575 508 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 MTG1Q9BT17 334 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 ARGLU1Q9NWB6 273 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 TAB2Q9NYJ8 693 aa21.13■□□□□ 0.97
PDLIM2-204ENST00000397760 CCDC175P0C221 793 aa21.12■□□□□ 0.97
PDLIM2-204ENST00000397760 SCP2P22307 547 aa21.12■□□□□ 0.97
PDLIM2-204ENST00000397760 CASQ1P31415 396 aa21.12■□□□□ 0.97
PDLIM2-204ENST00000397760 MTIF2P46199 727 aaKnown RBP21.12■□□□□ 0.97
PDLIM2-204ENST00000397760 COPB1P53618 953 aaKnown RBP21.12■□□□□ 0.97
PDLIM2-204ENST00000397760 NFIL3Q16649 462 aa21.12■□□□□ 0.97
PDLIM2-204ENST00000397760 ERCC6LQ2NKX8 1250 aa21.12■□□□□ 0.97
PDLIM2-204ENST00000397760 CNGA4Q8IV77 575 aa21.12■□□□□ 0.97
PDLIM2-204ENST00000397760 HMX1Q9NP08 348 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-204ENST00000397760 ASAP2O43150 1006 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 GNA14O95837 355 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 MYCNP04198 464 aaPredicted RBP21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 GJB1P08034 283 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 SRGAP2CP0DJJ0 459 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 ADKP55263 362 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 TUBB2AQ13885 445 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 TRIM14Q14142 442 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 BMS1Q14692 1282 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 TAS1R3Q7RTX0 852 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 RNF149Q8NC42 400 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 KLHDC9Q8NEP7 349 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 LMBR1Q8WVP7 490 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 KCNN1Q92952 543 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 TUBGCP2Q9BSJ2 902 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 TUBB2BQ9BVA1 445 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 VPS16Q9H269 839 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 K7ERI5 159 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 TADA3O75528 432 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 URI1O94763 535 aaPredicted RBP21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 TFDP1Q14186 410 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 NFRKBQ6P4R8 1299 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 CXCL17Q6UXB2 119 aa21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 V9GYY5 206 aaPredicted RBP21.11■□□□□ 0.97
PDLIM2-204ENST00000397760 N4BP3O15049 544 aa21.1■□□□□ 0.97
PDLIM2-204ENST00000397760 SNRPFP62306 86 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-204ENST00000397760 GOLGA8FQ08AF8 430 aa21.1■□□□□ 0.97
PDLIM2-204ENST00000397760 GOLGA8DPQ0D2H9 430 aa21.1■□□□□ 0.97
PDLIM2-204ENST00000397760 STRN3Q13033 797 aa21.1■□□□□ 0.97
PDLIM2-204ENST00000397760 CCDC40Q4G0X9 1142 aa21.1■□□□□ 0.97
PDLIM2-204ENST00000397760 NLRP4Q96MN2 994 aa21.1■□□□□ 0.97
PDLIM2-204ENST00000397760 TMEM134Q9H6X4 195 aa21.1■□□□□ 0.97
PDLIM2-204ENST00000397760 PRDM4Q9UKN5 801 aa21.1■□□□□ 0.97
PDLIM2-204ENST00000397760 AKT3Q9Y243 479 aa21.1■□□□□ 0.97
PDLIM2-204ENST00000397760 PTPN22Q9Y2R2 807 aa21.1■□□□□ 0.97
PDLIM2-204ENST00000397760 TISP43B9A030 160 aa21.09■□□□□ 0.97
PDLIM2-204ENST00000397760 ATP8B1O43520 1251 aa21.09■□□□□ 0.97
PDLIM2-204ENST00000397760 MSCO60682 206 aa21.09■□□□□ 0.97
PDLIM2-204ENST00000397760 CST5P28325 142 aaPredicted RBP21.09■□□□□ 0.97
PDLIM2-204ENST00000397760 KCNA10Q16322 511 aa21.09■□□□□ 0.97
PDLIM2-204ENST00000397760 C7orf31Q8N865 590 aa21.09■□□□□ 0.97
PDLIM2-204ENST00000397760 DMAC2Q9NW81 257 aa21.09■□□□□ 0.97
PDLIM2-204ENST00000397760 MFAP3LO75121 409 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 ASGR1P07306 291 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 CYP2J2P51589 502 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 EFNA5P52803 228 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 GNG11P61952 73 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 TUBB4BP68371 445 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 ARHGAP29Q52LW3 1261 aa21.08■□□□□ 0.97
PDLIM2-204ENST00000397760 CDCA2Q69YH5 1023 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms