RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 PTGS1P23219 599 aa20.81■□□□□ 0.92
TSPAN4-204ENST00000397404 LIG4P49917 911 aa20.81■□□□□ 0.92
TSPAN4-204ENST00000397404 SOX10P56693 466 aa20.81■□□□□ 0.92
TSPAN4-204ENST00000397404 BEX3Q00994 111 aa20.81■□□□□ 0.92
TSPAN4-204ENST00000397404 VWA3BQ502W6 1294 aa20.81■□□□□ 0.92
TSPAN4-204ENST00000397404 LRRC71Q8N4P6 559 aa20.81■□□□□ 0.92
TSPAN4-204ENST00000397404 LENG1Q96BZ8 264 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-204ENST00000397404 NUP58Q9BVL2 599 aa20.81■□□□□ 0.92
TSPAN4-204ENST00000397404 NDST4Q9H3R1 872 aa20.81■□□□□ 0.92
TSPAN4-204ENST00000397404 PTPN22Q9Y2R2 807 aa20.81■□□□□ 0.92
TSPAN4-204ENST00000397404 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.81■□□□□ 0.92
TSPAN4-204ENST00000397404 ACKR2O00590 384 aa20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 STX10O60499 249 aa20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 POU5F1Q01860 360 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 TRIM32Q13049 653 aa20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 HSP90AA4PQ58FG1 418 aa20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 CCSAPQ6IQ19 270 aaPredicted RBP20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 APBB1IPQ7Z5R6 666 aaPredicted RBP20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 RSPH3Q86UC2 560 aa20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 CREBRFQ8IUR6 639 aa20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 FAM186BQ8IYM0 893 aa20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 CCDC113Q9H0I3 377 aa20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 FZD8Q9H461 694 aa20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 SETD4Q9NVD3 440 aa20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 DAAM1Q9Y4D1 1078 aa20.8■□□□□ 0.92
TSPAN4-204ENST00000397404 TOM1L1O75674 476 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 PGK1P00558 417 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 KRT13P13646 458 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 PBX1P40424 430 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 CLCN3P51790 818 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 UBXN1Q04323 297 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 NCBP1Q09161 790 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 PKN2Q16513 984 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 KYAT1Q16773 422 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 RPAINQ86UA6 219 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 KIAA0319LQ8IZA0 1049 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 TRAPPC12Q8WVT3 735 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 FBXL18Q96ME1 805 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 ERGIC2Q96RQ1 377 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 VPS16Q9H269 839 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 HSPBP1Q9NZL4 362 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 GTF2IRD1Q9UHL9 959 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 PTCH2Q9Y6C5 1203 aa20.79■□□□□ 0.92
TSPAN4-204ENST00000397404 GTPBP10A4D1E9 387 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 N4BP1O75113 896 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 AKAP3O75969 853 aa20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 ASGR1P07306 291 aa20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 SRGAP2CP0DJJ0 459 aa20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 SFPQP23246 707 aaKnown RBP eCLIP20.78■□□□□ 0.922e-6■■■■□ 23.9
TSPAN4-204ENST00000397404 DRP2Q13474 957 aa20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 KCNA10Q16322 511 aa20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 CEP135Q66GS9 1140 aa20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 FAM43BQ6ZT52 329 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 TAS1R3Q7RTX0 852 aa20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 CCDC150Q8NCX0 1101 aa20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 POMGNT1Q8WZA1 660 aa20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 KIFC3Q9BVG8 833 aa20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 TAB2Q9NYJ8 693 aa20.78■□□□□ 0.92
TSPAN4-204ENST00000397404 CLIC2O15247 247 aa20.77■□□□□ 0.92
TSPAN4-204ENST00000397404 P4HA2O15460 535 aa20.77■□□□□ 0.92
TSPAN4-204ENST00000397404 PRKCBP05771 671 aa20.77■□□□□ 0.92
TSPAN4-204ENST00000397404 CYP2C9P11712 490 aa20.77■□□□□ 0.92
TSPAN4-204ENST00000397404 GPC3P51654 580 aa20.77■□□□□ 0.92
TSPAN4-204ENST00000397404 FIGNQ5HY92 759 aa20.77■□□□□ 0.92
TSPAN4-204ENST00000397404 TSHZ1Q6ZSZ6 1077 aa20.77■□□□□ 0.92
TSPAN4-204ENST00000397404 NLRP4Q96MN2 994 aa20.77■□□□□ 0.92
TSPAN4-204ENST00000397404 GCOM2Q9BZD3 368 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-204ENST00000397404 PES1O00541 588 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 PMM2O15305 246 aa20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 AFPP02771 609 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 CETN1Q12798 172 aa20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 MIIPQ5JXC2 388 aa20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 GPD1LQ8N335 351 aa20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 DNAJC5GQ8N7S2 189 aa20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 BORCS6Q96GS4 357 aa20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 GLT1D1Q96MS3 346 aa20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 IFT122Q9HBG6 1241 aa20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 INTS13Q9NVM9 706 aa20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 HDAC6Q9UBN7 1215 aa20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 EVPLQ92817 2033 aa20.76■□□□□ 0.91
TSPAN4-204ENST00000397404 MYADML2A6NDP7 307 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 CLDN3O15551 220 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 EXTL3O43909 919 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 CAND2O75155 1236 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 CYP2J2P51589 502 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 MBTD1Q05BQ5 628 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 BFSP1Q12934 665 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 SLC9C1Q4G0N8 1177 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 LHX8Q68G74 356 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 CXCL17Q6UXB2 119 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 TMC6Q7Z403 805 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 KSR1Q8IVT5 923 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 TMC2Q8TDI7 906 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 NLRP7Q8WX94 980 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 EDEM3Q9BZQ6 932 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.75■□□□□ 0.913e-6■■■■□ 23.5
TSPAN4-204ENST00000397404 ZNF233A6NK53 670 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 INO80B-WBP1J3KQ70 363 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 M0QZ92 97 aa20.75■□□□□ 0.91
TSPAN4-204ENST00000397404 ADSSP30520 456 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms