RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 EPHB6O15197 1021 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 ADAMTS4O75173 837 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 NOL4O94818 638 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 SMIM10L2AP0DMW4 78 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 SMIM10L2BP0DMW5 78 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 CCND3P30281 292 aaPredicted RBP13.9□□□□□ -0.18
TRIM39-204ENST00000396548 EFNA5P52803 228 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 PPFIA1Q13136 1202 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 MFSD10Q14728 455 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 RETREG2Q8NC44 543 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 LMBR1Q8WVP7 490 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 FZD8Q9H461 694 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 KAT6AQ92794 2004 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 TTC26A0AVF1 554 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 FAM189A1O60320 539 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 IQCF3P0C7M6 154 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 SFPQP23246 707 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRIM39-204ENST00000396548 PTENP60484 403 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 ENPEPQ07075 957 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 KIAA0753Q2KHM9 967 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 FKBP15Q5T1M5 1219 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 CCSAPQ6IQ19 270 aaPredicted RBP13.9□□□□□ -0.18
TRIM39-204ENST00000396548 PXYLP1Q8TE99 480 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 AP5M1Q9H0R1 490 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 FRMD4BQ9Y2L6 1034 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 NRCAMQ92823 1304 aa13.9□□□□□ -0.18
TRIM39-204ENST00000396548 RRN3P2A6NIE6 340 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 K7ERI5 159 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 AFPP02771 609 aaKnown RBP13.89□□□□□ -0.19
TRIM39-204ENST00000396548 ADRB2P07550 413 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 ELNP15502 786 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 PSEN2P49810 448 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 IGBP1P78318 339 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 MBTD1Q05BQ5 628 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 KIAA0319LQ8IZA0 1049 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 MFSD14AQ96MC6 490 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 DNAJC7Q99615 494 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 KCND1Q9NSA2 647 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 USP20Q9Y2K6 914 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 GTPBP10A4D1E9 387 aaKnown RBP13.89□□□□□ -0.19
TRIM39-204ENST00000396548 ZNF500O60304 480 aaPredicted RBP13.89□□□□□ -0.19
TRIM39-204ENST00000396548 PROZP22891 400 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 BFSP1Q12934 665 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 RHPN2Q8IUC4 686 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 KLHDC9Q8NEP7 349 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 NUP58Q9BVL2 599 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 MINDY3Q9H8M7 445 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 PTPRHQ9HD43 1115 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 SETD4Q9NVD3 440 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 DNAH12Q6ZR08 3092 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 BRCA2P51587 3418 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 EXOC3O60645 756 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 KCNJ6P48051 423 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 DLG4P78352 724 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 AMHR2Q16671 573 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 FAM187BQ17R55 369 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 CRELD2Q6UXH1 353 aaPredicted RBP13.89□□□□□ -0.19
TRIM39-204ENST00000396548 ZPBP2Q6X784 338 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 RNF149Q8NC42 400 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 ZNF296Q8WUU4 475 aaPredicted RBP13.89□□□□□ -0.19
TRIM39-204ENST00000396548 C2orf40Q9H1Z8 148 aa13.89□□□□□ -0.19
TRIM39-204ENST00000396548 ANK1P16157 1881 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 TRIP12Q14669 1992 aaPredicted RBP13.88□□□□□ -0.19
TRIM39-204ENST00000396548 A0A0B4J269 797 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 SKILP12757 684 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 HOXD10P28358 340 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 PPFIBP1Q86W92 1011 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 CCDC51Q96ER9 411 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 ACO2Q99798 780 aaKnown RBP13.88□□□□□ -0.19
TRIM39-204ENST00000396548 SIX2Q9NPC8 291 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 ABHD10Q9NUJ1 306 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 HNRNPDLO14979 420 aaKnown RBP13.88□□□□□ -0.19
TRIM39-204ENST00000396548 PMM2O15305 246 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 KPNA6O60684 536 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 SRGAP2CP0DJJ0 459 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
TRIM39-204ENST00000396548 CST5P28325 142 aaPredicted RBP13.88□□□□□ -0.19
TRIM39-204ENST00000396548 CLDN10P78369 228 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 STRN3Q13033 797 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 NFRKBQ6P4R8 1299 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 INTS8Q75QN2 995 aaKnown RBP13.88□□□□□ -0.19
TRIM39-204ENST00000396548 CBWD2Q8IUF1 395 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 METTL13Q8N6R0 699 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 IQCDQ96DY2 449 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 GANQ9H2C0 597 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 ADAMTS10Q9H324 1103 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 RRAGDQ9NQL2 400 aaPredicted RBP13.88□□□□□ -0.19
TRIM39-204ENST00000396548 AGPAT5Q9NUQ2 364 aa13.88□□□□□ -0.19
TRIM39-204ENST00000396548 FKTNO75072 461 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 HMGCRP04035 888 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 MYL3P08590 195 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 TFDP1Q14186 410 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 SNRNP35Q16560 246 aaKnown RBP13.87□□□□□ -0.19
TRIM39-204ENST00000396548 CBWD6Q4V339 395 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 CBWD3Q5JTY5 395 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 CBWD5Q5RIA9 395 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 TSHZ1Q6ZSZ6 1077 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 CNGA4Q8IV77 575 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 BAP1Q92560 729 aa13.87□□□□□ -0.19
TRIM39-204ENST00000396548 SAAL1Q96ER3 474 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms