RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 C4orf32Q8N8J7 132 aa20.36■□□□□ 0.85
FXN-203ENST00000396366 SMG8Q8ND04 991 aaKnown RBP20.36■□□□□ 0.85
FXN-203ENST00000396366 PGBD4Q96DM1 585 aa20.36■□□□□ 0.85
FXN-203ENST00000396366 CCDC43Q96MW1 224 aaKnown RBP20.36■□□□□ 0.85
FXN-203ENST00000396366 LRFN3Q9BTN0 628 aa20.36■□□□□ 0.85
FXN-203ENST00000396366 EIF2AQ9BY44 585 aaKnown RBP20.36■□□□□ 0.85
FXN-203ENST00000396366 PRKAG3Q9UGI9 489 aa20.36■□□□□ 0.85
FXN-203ENST00000396366 INO80B-WBP1J3KQ70 363 aa20.35■□□□□ 0.85
FXN-203ENST00000396366 USO1O60763 962 aaKnown RBP20.35■□□□□ 0.85
FXN-203ENST00000396366 DDHD2O94830 711 aa20.35■□□□□ 0.85
FXN-203ENST00000396366 GALTP07902 379 aa20.35■□□□□ 0.85
FXN-203ENST00000396366 XRCC6P12956 609 aaKnown RBP eCLIP20.35■□□□□ 0.85
FXN-203ENST00000396366 TOB1P50616 345 aaPredicted RBP20.35■□□□□ 0.85
FXN-203ENST00000396366 MBTD1Q05BQ5 628 aa20.35■□□□□ 0.85
FXN-203ENST00000396366 KCNC3Q14003 757 aa20.35■□□□□ 0.85
FXN-203ENST00000396366 POTEGQ6S5H5 508 aa20.35■□□□□ 0.85
FXN-203ENST00000396366 SMRP1Q8NCR6 262 aa20.35■□□□□ 0.85
FXN-203ENST00000396366 POLR3FQ9H1D9 316 aaPredicted RBP20.35■□□□□ 0.85
FXN-203ENST00000396366 RNF39Q9H2S5 420 aa20.35■□□□□ 0.85
FXN-203ENST00000396366 NGRNQ9NPE2 291 aaKnown RBP20.35■□□□□ 0.85
FXN-203ENST00000396366 B4GALT5O43286 388 aa20.34■□□□□ 0.85
FXN-203ENST00000396366 ERLIN2O94905 339 aa20.34■□□□□ 0.85
FXN-203ENST00000396366 CD2BP2O95400 341 aaKnown RBP20.34■□□□□ 0.85
FXN-203ENST00000396366 POMCP01189 267 aa20.34■□□□□ 0.85
FXN-203ENST00000396366 SLC11A1P49279 550 aa20.34■□□□□ 0.85
FXN-203ENST00000396366 RNASELQ05823 741 aaKnown RBP20.34■□□□□ 0.85
FXN-203ENST00000396366 TFDP1Q14186 410 aa20.34■□□□□ 0.85
FXN-203ENST00000396366 AMHR2Q16671 573 aa20.34■□□□□ 0.85
FXN-203ENST00000396366 MRPL43Q8N983 215 aaKnown RBP20.34■□□□□ 0.85
FXN-203ENST00000396366 AUTS2Q8WXX7 1259 aa20.34■□□□□ 0.85
FXN-203ENST00000396366 CDCA3Q99618 268 aaPredicted RBP20.34■□□□□ 0.85
FXN-203ENST00000396366 POLR3CQ9BUI4 534 aaPredicted RBP20.34■□□□□ 0.85
FXN-203ENST00000396366 APOL5Q9BWW9 433 aa20.34■□□□□ 0.85
FXN-203ENST00000396366 RSAD1Q9HA92 442 aa20.34■□□□□ 0.85
FXN-203ENST00000396366 TUFT1Q9NNX1 390 aa20.34■□□□□ 0.85
FXN-203ENST00000396366 USP15Q9Y4E8 981 aaPredicted RBP20.34■□□□□ 0.85
FXN-203ENST00000396366 HES2Q9Y543 173 aa20.34■□□□□ 0.85
FXN-203ENST00000396366 TRIOO75962 3097 aa20.33■□□□□ 0.85
FXN-203ENST00000396366 C2orf71A6NGG8 1288 aa20.33■□□□□ 0.85
FXN-203ENST00000396366 CXCL14O95715 111 aa20.33■□□□□ 0.85
FXN-203ENST00000396366 NCLP19338 710 aaKnown RBP20.33■□□□□ 0.85
FXN-203ENST00000396366 POU5F1BQ06416 359 aa20.33■□□□□ 0.85
FXN-203ENST00000396366 SMC1AQ14683 1233 aaKnown RBP20.33■□□□□ 0.85
FXN-203ENST00000396366 RABEP1Q15276 862 aa20.33■□□□□ 0.85
FXN-203ENST00000396366 ECM1Q16610 540 aa20.33■□□□□ 0.85
FXN-203ENST00000396366 TMEM31Q5JXX7 168 aa20.33■□□□□ 0.85
FXN-203ENST00000396366 CDR2LQ86X02 465 aaPredicted RBP20.33■□□□□ 0.85
FXN-203ENST00000396366 IFNLR1Q8IU57 520 aaPredicted RBP20.33■□□□□ 0.85
FXN-203ENST00000396366 TMEM169Q96HH4 297 aa20.33■□□□□ 0.85
FXN-203ENST00000396366 IGSF21Q96ID5 467 aa20.33■□□□□ 0.85
FXN-203ENST00000396366 VN1R3Q9BXE9 311 aa20.33■□□□□ 0.85
FXN-203ENST00000396366 POLD4Q9HCU8 107 aa20.33■□□□□ 0.85
FXN-203ENST00000396366 IPPQ9Y573 584 aa20.33■□□□□ 0.85
FXN-203ENST00000396366 ARF4P18085 180 aaPredicted RBP20.32■□□□□ 0.84
FXN-203ENST00000396366 U2AF2P26368 475 aaKnown RBP eCLIP20.32■□□□□ 0.84
FXN-203ENST00000396366 CA8P35219 290 aa20.32■□□□□ 0.84
FXN-203ENST00000396366 SYCE2Q6PIF2 218 aa20.32■□□□□ 0.84
FXN-203ENST00000396366 TMEM184AQ6ZMB5 413 aa20.32■□□□□ 0.84
FXN-203ENST00000396366 VPS52Q8N1B4 723 aa20.32■□□□□ 0.84
FXN-203ENST00000396366 NACC1Q96RE7 527 aa20.32■□□□□ 0.84
FXN-203ENST00000396366 S1PR5Q9H228 398 aa20.32■□□□□ 0.84
FXN-203ENST00000396366 MIOSQ9NXC5 875 aa20.32■□□□□ 0.84
FXN-203ENST00000396366 DBR1Q9UK59 544 aaKnown RBP20.32■□□□□ 0.84
FXN-203ENST00000396366 PCDHB6Q9Y5E3 794 aa20.32■□□□□ 0.84
FXN-203ENST00000396366 GPR37L1O60883 481 aa20.31■□□□□ 0.84
FXN-203ENST00000396366 CLASP2O75122 1294 aaKnown RBP20.31■□□□□ 0.84
FXN-203ENST00000396366 ITGA4P13612 1032 aa20.31■□□□□ 0.84
FXN-203ENST00000396366 RPA1P27694 616 aa20.31■□□□□ 0.84
FXN-203ENST00000396366 ORC2Q13416 577 aaPredicted RBP20.31■□□□□ 0.84
FXN-203ENST00000396366 ANKRD54Q6NXT1 300 aa20.31■□□□□ 0.84
FXN-203ENST00000396366 NOTUMQ6P988 496 aa20.31■□□□□ 0.84
FXN-203ENST00000396366 PADI6Q6TGC4 694 aa20.31■□□□□ 0.84
FXN-203ENST00000396366 URGCPQ8TCY9 931 aa20.31■□□□□ 0.84
FXN-203ENST00000396366 APOL6Q9BWW8 343 aa20.31■□□□□ 0.84
FXN-203ENST00000396366 ZBP1Q9H171 429 aa20.31■□□□□ 0.84
FXN-203ENST00000396366 CSRNP2Q9H175 543 aa20.31■□□□□ 0.84
FXN-203ENST00000396366 CDH22Q9UJ99 828 aa20.31■□□□□ 0.84
FXN-203ENST00000396366 NOL7Q9UMY1 257 aaKnown RBP20.31■□□□□ 0.84
FXN-203ENST00000396366 LRRIQ4A6NIV6 560 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 AXLP30530 894 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 TRAPPC10P48553 1259 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 PTGDRQ13258 359 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 DDX53Q86TM3 631 aaKnown RBP20.3■□□□□ 0.84
FXN-203ENST00000396366 RNF135Q8IUD6 432 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 ERMNQ8TAM6 284 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 BSNDQ8WZ55 320 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 TMX3Q96JJ7 454 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 ZFP42Q96MM3 310 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 GAD1Q99259 594 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 NFKBIZQ9BYH8 718 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 LRWD1Q9UFC0 647 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 USP20Q9Y2K6 914 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 HCFC2Q9Y5Z7 792 aa20.3■□□□□ 0.84
FXN-203ENST00000396366 CNTNAP2Q9UHC6 1331 aa20.29■□□□□ 0.84
FXN-203ENST00000396366 ARL5CA6NH57 179 aa20.29■□□□□ 0.84
FXN-203ENST00000396366 TTLL13PA6NNM8 815 aa20.29■□□□□ 0.84
FXN-203ENST00000396366 DCXO43602 365 aa20.29■□□□□ 0.84
FXN-203ENST00000396366 ALADP13716 330 aa20.29■□□□□ 0.84
FXN-203ENST00000396366 AKAP5P24588 427 aa20.29■□□□□ 0.84
FXN-203ENST00000396366 CCT6AP40227 531 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms