RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 SP100P23497 879 aaPredicted RBP15.13■□□□□ 0.01
SCAF11-203ENST00000395453 PLCB3Q01970 1234 aa15.13■□□□□ 0.01
SCAF11-203ENST00000395453 SYCE2Q6PIF2 218 aa15.13■□□□□ 0.01
SCAF11-203ENST00000395453 KSR1Q8IVT5 923 aa15.13■□□□□ 0.01
SCAF11-203ENST00000395453 THNSL1Q8IYQ7 743 aa15.13■□□□□ 0.01
SCAF11-203ENST00000395453 CEP170P1Q96L14 293 aa15.13■□□□□ 0.01
SCAF11-203ENST00000395453 LXNQ9BS40 222 aa15.13■□□□□ 0.01
SCAF11-203ENST00000395453 ZSWIM4Q9H7M6 989 aa15.13■□□□□ 0.01
SCAF11-203ENST00000395453 TSHZ2Q9NRE2 1034 aa15.13■□□□□ 0.01
SCAF11-203ENST00000395453 WDR87Q6ZQQ6 2873 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 WNT7AO00755 349 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 ZBTB39O15060 712 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 MARCH6O60337 910 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 SLITRK3O94933 977 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 SFPQP23246 707 aaKnown RBP eCLIP15.12■□□□□ 0.01
SCAF11-203ENST00000395453 YWHABP31946 246 aaKnown RBP15.12■□□□□ 0.01
SCAF11-203ENST00000395453 RFC5P40937 340 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 PHKA2P46019 1235 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 KCNT2Q6UVM3 1135 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 OTUD6AQ7L8S5 288 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 DIS3L2Q8IYB7 885 aaKnown RBP15.12■□□□□ 0.01
SCAF11-203ENST00000395453 ADSSL1Q8N142 457 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 LRRC43Q8N309 656 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 PRPF31Q8WWY3 499 aaKnown RBP15.12■□□□□ 0.01
SCAF11-203ENST00000395453 SLC7A3Q8WY07 619 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 DYDC2Q96IM9 177 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 HSD17B14Q9BPX1 270 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 APOL5Q9BWW9 433 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 PUF60Q9UHX1 559 aaKnown RBP15.12■□□□□ 0.01
SCAF11-203ENST00000395453 PCDHA12Q9UN75 941 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 COL4A3BPQ9Y5P4 624 aa15.12■□□□□ 0.01
SCAF11-203ENST00000395453 MYO10Q9HD67 2058 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 GAS2O43903 313 aaKnown RBP15.11■□□□□ 0.01
SCAF11-203ENST00000395453 ZNF623O75123 536 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 LYPLA2O95372 231 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 BRD1O95696 1058 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 POLGP54098 1239 aaPredicted RBP15.11■□□□□ 0.01
SCAF11-203ENST00000395453 TPRNQ4KMQ1 711 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 PLPP4Q5VZY2 271 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 NCAPH2Q6IBW4 605 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 CES5AQ6NT32 575 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 FRMD5Q7Z6J6 570 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 ABI1Q8IZP0 508 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 RSPH1Q8WYR4 309 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 MRPS27Q92552 414 aaKnown RBP15.11■□□□□ 0.01
SCAF11-203ENST00000395453 NECTIN4Q96NY8 510 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 MTMR9Q96QG7 549 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 EIF2AK1Q9BQI3 630 aaKnown RBP15.11■□□□□ 0.01
SCAF11-203ENST00000395453 MFSD1Q9H3U5 465 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 NGRNQ9NPE2 291 aaKnown RBP15.11■□□□□ 0.01
SCAF11-203ENST00000395453 LIMCH1Q9UPQ0 1083 aa15.11■□□□□ 0.01
SCAF11-203ENST00000395453 ASAP2O43150 1006 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 SKIP12755 728 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 PPM1AP35813 382 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 CLCN5P51795 746 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 LAMTOR4Q0VGL1 99 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 TRIM29Q14134 588 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 CTTNQ14247 550 aaKnown RBP15.1■□□□□ 0.01
SCAF11-203ENST00000395453 CALCRLQ16602 461 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 LLGL2Q6P1M3 1020 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 SRGAP1Q7Z6B7 1085 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 TPH2Q8IWU9 490 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 RNF169Q8NCN4 708 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 HELQQ8TDG4 1101 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 PSPC1Q8WXF1 523 aaKnown RBP15.1■□□□□ 0.01
SCAF11-203ENST00000395453 TMEM143Q96AN5 459 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 NLRP4Q96MN2 994 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 ZNF558Q96NG5 402 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 KIF2CQ99661 725 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 TCF25Q9BQ70 676 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 TTC12Q9H892 705 aaPredicted RBP15.1■□□□□ 0.01
SCAF11-203ENST00000395453 ENTPD7Q9NQZ7 604 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 SPG21Q9NZD8 308 aa15.1■□□□□ 0.01
SCAF11-203ENST00000395453 ARID2Q68CP9 1835 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 C2CD4DB7Z1M9 353 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 HOXA11P31270 313 aaPredicted RBP15.09■□□□□ 0.01
SCAF11-203ENST00000395453 CYP4A11Q02928 519 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 ITIH3Q06033 890 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 XKR9Q5GH70 373 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 TWF2Q6IBS0 349 aaKnown RBP15.09■□□□□ 0.01
SCAF11-203ENST00000395453 CATSPER4Q7RTX7 472 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 FERMT3Q86UX7 667 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 TCP11Q8WWU5 503 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 CASP10Q92851 521 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 LLPHQ9BRT6 129 aaKnown RBP15.09■□□□□ 0.01
SCAF11-203ENST00000395453 MRPL9Q9BYD2 267 aaKnown RBP15.09■□□□□ 0.01
SCAF11-203ENST00000395453 OCEL1Q9H607 264 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 MINDY3Q9H8M7 445 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 XPNPEP1Q9NQW7 623 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 ANKEF1Q9NU02 776 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 AGPAT5Q9NUQ2 364 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 FAM105AQ9NUU6 356 aa15.09■□□□□ 0.01
SCAF11-203ENST00000395453 PIN4Q9Y237 131 aaKnown RBP15.09■□□□□ 0.01
SCAF11-203ENST00000395453 EP300Q09472 2414 aaPredicted RBP15.08■□□□□ 0
SCAF11-203ENST00000395453 NEMFO60524 1076 aa15.08■□□□□ 0
SCAF11-203ENST00000395453 CENPBP07199 599 aaPredicted RBP15.08■□□□□ 0
SCAF11-203ENST00000395453 SRGAP2CP0DJJ0 459 aa15.08■□□□□ 0
SCAF11-203ENST00000395453 PYGBP11216 843 aa15.08■□□□□ 0
SCAF11-203ENST00000395453 PBX3P40426 434 aa15.08■□□□□ 0
SCAF11-203ENST00000395453 RAB27AP51159 221 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms