RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 INO80BQ9C086 356 aaPredicted RBP12.92□□□□□ -0.34
HLA-DQA1-203ENST00000395363 NRDE2Q9H7Z3 1164 aa12.92□□□□□ -0.34
HLA-DQA1-203ENST00000395363 TBC1D13Q9NVG8 400 aa12.92□□□□□ -0.34
HLA-DQA1-203ENST00000395363 DACT1Q9NYF0 836 aa12.92□□□□□ -0.34
HLA-DQA1-203ENST00000395363 MUC6Q6W4X9 2439 aa12.92□□□□□ -0.34
HLA-DQA1-203ENST00000395363 ZNF318Q5VUA4 2279 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 DKC1O60832 514 aaKnown RBP eCLIP12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 OFD1O75665 1012 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 DDHD2O94830 711 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 LYPLA2O95372 231 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 LIG1P18858 919 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 SP100P23497 879 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 ARL2P36404 184 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 SLC11A1P49279 550 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 AMHR2Q16671 573 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 MCTP1Q6DN14 999 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 KANK3Q6NY19 840 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 SLC39A11Q8N1S5 342 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 MRPS27Q92552 414 aaKnown RBP12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 MSLNLQ96KJ4 702 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 TBC1D32Q96NH3 1257 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 JPH2Q9BR39 696 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 CXCL16Q9H2A7 254 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 NXF3Q9H4D5 531 aaKnown RBP12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 TLE6Q9H808 572 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 C11orf16Q9NQ32 467 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 ANKEF1Q9NU02 776 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 DOCK8Q8NF50 2099 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 ZDBF2Q9HCK1 2354 aa12.91□□□□□ -0.34
HLA-DQA1-203ENST00000395363 LRRIQ4A6NIV6 560 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 HOXA2O43364 376 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 ERLIN2O94905 339 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 POMCP01189 267 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 SSBP05455 408 aaKnown RBP eCLIP12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 ARF4P18085 180 aaPredicted RBP12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 CCT6AP40227 531 aaKnown RBP12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 PTENP60484 403 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 ZP2Q05996 745 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 PTGDRQ13258 359 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 NOMO2Q5JPE7 1267 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 KCNK18Q7Z418 384 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 SRGAP1Q7Z6B7 1085 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 EFHBQ8N7U6 833 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 TCP11Q8WWU5 503 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 RABGGTAQ92696 567 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 ZFP42Q96MM3 310 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 CHST12Q9NRB3 414 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 AAASQ9NRG9 546 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 MIOSQ9NXC5 875 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 SPG21Q9NZD8 308 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 CD207Q9UJ71 328 aa12.9□□□□□ -0.34
HLA-DQA1-203ENST00000395363 ST18O60284 1047 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 EIF5BO60841 1220 aaKnown RBP12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 DGAT1O75907 488 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 NPTXRO95502 500 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 EOMESO95936 686 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 WEE2P0C1S8 567 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 MYBP10242 640 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 AKAP5P24588 427 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 U2AF2P26368 475 aaKnown RBP eCLIP12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 MLH1P40692 756 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 RNASELQ05823 741 aaKnown RBP12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 DUSP6Q16828 381 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 NAALADL2Q58DX5 795 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 GLB1LQ6UWU2 654 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 TMC7Q7Z402 723 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 GJD3Q8N144 294 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PLIN2Q99541 437 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 RSAD1Q9HA92 442 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 KLK14Q9P0G3 267 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PRG3Q9Y2Y8 225 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 IPPQ9Y573 584 aa12.89□□□□□ -0.35
HLA-DQA1-203ENST00000395363 E9PMD0 336 aa12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 GALTP07902 379 aa12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 SCNN1GP51170 649 aa12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PLCB3Q01970 1234 aa12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ZRSR1Q15695 479 aaKnown RBP12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PADI6Q6TGC4 694 aa12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ZNF710Q8N1W2 664 aa12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 SNX29Q8TEQ0 813 aa12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 B3GALT6Q96L58 329 aa12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 GAD1Q99259 594 aa12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 MMTAG2Q9BU76 263 aaKnown RBP12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 POLR3CQ9BUI4 534 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 TUFT1Q9NNX1 390 aa12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 DDX19AQ9NUU7 478 aaKnown RBP12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 NOL7Q9UMY1 257 aaKnown RBP12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 KIAA1024Q9UPX6 916 aa12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 USP15Q9Y4E8 981 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ARHGEF35A5YM69 484 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 C2orf71A6NGG8 1288 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 GAS2O43903 313 aaKnown RBP12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ZNF623O75123 536 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 COL9A1P20849 921 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 RPA1P27694 616 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 RAB27AP51159 221 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 CDC42EP1Q00587 391 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 UBE3AQ05086 875 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 RAD51AP2Q09MP3 1159 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms