RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 NOP2P46087 812 aaKnown RBP15.14■□□□□ 0.01
SNCA-204ENST00000394989 SP4Q02446 784 aa15.14■□□□□ 0.01
SNCA-204ENST00000394989 FSTL1Q12841 308 aa15.14■□□□□ 0.01
SNCA-204ENST00000394989 SWSAP1Q6NVH7 229 aa15.14■□□□□ 0.01
SNCA-204ENST00000394989 SLC39A4Q6P5W5 647 aa15.14■□□□□ 0.01
SNCA-204ENST00000394989 H2AFVQ71UI9 128 aa15.14■□□□□ 0.01
SNCA-204ENST00000394989 AENQ8WTP8 325 aaKnown RBP15.14■□□□□ 0.01
SNCA-204ENST00000394989 CEP170P1Q96L14 293 aa15.14■□□□□ 0.01
SNCA-204ENST00000394989 JPH1Q9HDC5 661 aaPredicted RBP15.14■□□□□ 0.01
SNCA-204ENST00000394989 PDLIM7Q9NR12 457 aa15.14■□□□□ 0.01
SNCA-204ENST00000394989 TAS2R14Q9NYV8 317 aa15.14■□□□□ 0.01
SNCA-204ENST00000394989 IGSF9BQ9UPX0 1349 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 PTPRFP10586 1907 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 A0A0A6YYK5 440 aaPredicted RBP15.13■□□□□ 0.01
SNCA-204ENST00000394989 MAPK13O15264 365 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 USP2O75604 605 aaPredicted RBP15.13■□□□□ 0.01
SNCA-204ENST00000394989 CNGA1P29973 690 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 KIF22Q14807 665 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 SLFN11Q7Z7L1 901 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 CCDC125Q86Z20 511 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 SELENOOQ9BVL4 669 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 TMEM117Q9H0C3 514 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 UBE2TQ9NPD8 197 aaPredicted RBP15.13■□□□□ 0.01
SNCA-204ENST00000394989 OSGEPQ9NPF4 335 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 INTUQ9ULD6 942 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 DENND3A2RUS2 1198 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 TMCO5BA8MYB1 307 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 KIF4AO95239 1232 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 MAP9Q49MG5 647 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 GPC2Q8N158 579 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 ZNF526Q8TF50 670 aaPredicted RBP15.13■□□□□ 0.01
SNCA-204ENST00000394989 SAAL1Q96ER3 474 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 NTPCRQ9BSD7 190 aaKnown RBP15.13■□□□□ 0.01
SNCA-204ENST00000394989 XPNPEP1Q9NQW7 623 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 TMOD4Q9NZQ9 345 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 HPCAL4Q9UM19 191 aa15.13■□□□□ 0.01
SNCA-204ENST00000394989 SPATA31C2B4DYI2 1134 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 ACTN2P35609 894 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 RNASE9P60153 205 aaKnown RBP15.12■□□□□ 0.01
SNCA-204ENST00000394989 ACTR2P61160 394 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 SNRPFP62306 86 aaKnown RBP15.12■□□□□ 0.01
SNCA-204ENST00000394989 DMP1Q13316 513 aaPredicted RBP15.12■□□□□ 0.01
SNCA-204ENST00000394989 SNRNP35Q16560 246 aaKnown RBP15.12■□□□□ 0.01
SNCA-204ENST00000394989 ABHD15Q6UXT9 468 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.12■□□□□ 0.01
SNCA-204ENST00000394989 KAT5Q92993 513 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 VIPAS39Q9H9C1 493 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 STIM2Q9P246 746 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 SLC9A2Q9UBY0 812 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 STXBP5LQ9Y2K9 1186 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 PPP2R3BQ9Y5P8 575 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 SNCAIPQ9Y6H5 919 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 DICER1Q9UPY3 1922 aaKnown RBP15.12■□□□□ 0.01
SNCA-204ENST00000394989 PAPPA2Q9BXP8 1791 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 NFASCO94856 1347 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 KCNK3O14649 394 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 P4HA2O15460 535 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 LMNB1P20700 586 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 RFX1P22670 979 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 RPS6KA1Q15418 735 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 TREML2Q5T2D2 321 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 SLC20A1Q8WUM9 679 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 IWS1Q96ST2 819 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 HOXC10Q9NYD6 342 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 TMEM59LQ9UK28 342 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 PCNTO95613 3336 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 EIF3JO75822 258 aaKnown RBP15.12■□□□□ 0.01
SNCA-204ENST00000394989 VGLL4Q14135 290 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 SH3D19Q5HYK7 790 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 C8orf74Q6P047 294 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 OTUD6AQ7L8S5 288 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 USP38Q8NB14 1042 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 ATP6V0A1Q93050 837 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 KMT5AQ9NQR1 393 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 DAAM1Q9Y4D1 1078 aa15.12■□□□□ 0.01
SNCA-204ENST00000394989 PSAPP07602 524 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 GLI1P08151 1106 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 SMTNP53814 917 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 PRKCEQ02156 737 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 CCDC70Q6NSX1 233 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 PACS2Q86VP3 889 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 SLC17A8Q8NDX2 589 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 POP1Q99575 1024 aaKnown RBP15.11■□□□□ 0.01
SNCA-204ENST00000394989 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.11■□□□□ 0.012e-6■■■■■ 149.1
SNCA-204ENST00000394989 OTOFQ9HC10 1997 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 ZSCAN5CA6NGD5 496 aaPredicted RBP15.11■□□□□ 0.01
SNCA-204ENST00000394989 CES2O00748 559 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 CNTN2Q02246 1040 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 IFI16Q16666 785 aaKnown RBP15.11■□□□□ 0.01
SNCA-204ENST00000394989 TAS1R3Q7RTX0 852 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 SLC35G2Q8TBE7 412 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 SPIRE2Q8WWL2 714 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 RUBCNQ92622 972 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 KIFAP3Q92845 792 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 SEMA4DQ92854 862 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 ARHGEF26Q96DR7 871 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 NCANO14594 1321 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 MYPNQ86TC9 1320 aa15.11■□□□□ 0.01
SNCA-204ENST00000394989 PMM2O15305 246 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms