RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 PRRX2Q99811 253 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 HSD17B14Q9BPX1 270 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 SH2D3AQ9BRG2 576 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
CTSC-202ENST00000393301 TMEM175Q9BSA9 504 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 NFKBIZQ9BYH8 718 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 ORC3Q9UBD5 711 aaPredicted RBP13.79□□□□□ -0.2
CTSC-202ENST00000393301 TDRD15B5MCY1 1934 aaKnown RBP13.79□□□□□ -0.2
CTSC-202ENST00000393301 MEIS3P2A8K0S8 358 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 CCNT1O60563 726 aaKnown RBP13.78□□□□□ -0.2
CTSC-202ENST00000393301 LILRB3O75022 631 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 PDIA4P13667 645 aaKnown RBP13.78□□□□□ -0.2
CTSC-202ENST00000393301 NCLP19338 710 aaKnown RBP13.78□□□□□ -0.2
CTSC-202ENST00000393301 LAMTOR4Q0VGL1 99 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 ST3GAL1Q11201 340 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 EMC2Q15006 297 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 KIAA1841Q6NSI8 718 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 OTUD6AQ7L8S5 288 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 FERMT3Q86UX7 667 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 KSR1Q8IVT5 923 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 RNF168Q8IYW5 571 aaPredicted RBP13.78□□□□□ -0.2
CTSC-202ENST00000393301 VPS52Q8N1B4 723 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
CTSC-202ENST00000393301 RNF169Q8NCN4 708 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 SLC22A17Q8WUG5 538 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 PRPF31Q8WWY3 499 aaKnown RBP13.78□□□□□ -0.2
CTSC-202ENST00000393301 TMX3Q96JJ7 454 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 NLRP4Q96MN2 994 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 RHOBTB2Q9BYZ6 727 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 MINDY3Q9H8M7 445 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 UBN1Q9NPG3 1134 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 XPNPEP1Q9NQW7 623 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 GJB4Q9NTQ9 266 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 KANSL3Q9P2N6 904 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 NR2E1Q9Y466 385 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 PCDHB2Q9Y5E7 798 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 C2orf16Q68DN1 1984 aa13.78□□□□□ -0.2
CTSC-202ENST00000393301 B4GALT3O60512 393 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 ZC3H11AO75152 810 aaKnown RBP eCLIP13.77□□□□□ -0.21
CTSC-202ENST00000393301 SLITRK3O94933 977 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 LARGE1O95461 756 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 C1RP00736 705 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 KRT2P35908 639 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 MTHFRP42898 656 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 SLC11A1P49279 550 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 NUBP1P53384 320 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 PTENP60484 403 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 MXD4Q14582 209 aaPredicted RBP13.77□□□□□ -0.21
CTSC-202ENST00000393301 GPR65Q8IYL9 337 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 BCL7CQ8WUZ0 217 aaPredicted RBP13.77□□□□□ -0.21
CTSC-202ENST00000393301 LPPQ93052 612 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 VN1R3Q9BXE9 311 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 RSAD1Q9HA92 442 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 ANKEF1Q9NU02 776 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 RGL1Q9NZL6 768 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 DAXXQ9UER7 740 aaPredicted RBP13.77□□□□□ -0.21
CTSC-202ENST00000393301 USTQ9Y2C2 406 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 KIF3AQ9Y496 699 aa13.77□□□□□ -0.21
CTSC-202ENST00000393301 MTCL1Q9Y4B5 1905 aaKnown RBP13.77□□□□□ -0.21
CTSC-202ENST00000393301 NT5C1B-RDH14C9J2C7 533 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 DGAT1O75907 488 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 BAG4O95429 457 aaKnown RBP13.76□□□□□ -0.21
CTSC-202ENST00000393301 XRCC6P12956 609 aaKnown RBP eCLIP13.76□□□□□ -0.21
CTSC-202ENST00000393301 DSC1Q08554 894 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 NR5A1Q13285 461 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 PTPN14Q15678 1187 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 AMHR2Q16671 573 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 CES5AQ6NT32 575 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 PPFIBP1Q86W92 1011 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 ZDHHC14Q8IZN3 488 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 FBXL6Q8N531 539 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 URGCPQ8TCY9 931 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 TMEM143Q96AN5 459 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 DYDC2Q96IM9 177 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 RPGRIP1Q96KN7 1286 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 MTMR9Q96QG7 549 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 MTRQ99707 1265 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 POMKQ9H5K3 350 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 BRMS1Q9HCU9 246 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 DOCK8Q8NF50 2099 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 MYO15AQ9UKN7 3530 aa13.76□□□□□ -0.21
CTSC-202ENST00000393301 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.75□□□□□ -0.21
CTSC-202ENST00000393301 FAM205CA6NFA0 338 aa13.75□□□□□ -0.21
CTSC-202ENST00000393301 DDHD2O94830 711 aa13.75□□□□□ -0.21
CTSC-202ENST00000393301 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
CTSC-202ENST00000393301 CXCL14O95715 111 aa13.75□□□□□ -0.21
CTSC-202ENST00000393301 ARL2P36404 184 aa13.75□□□□□ -0.21
CTSC-202ENST00000393301 ORC2Q13416 577 aaPredicted RBP13.75□□□□□ -0.21
CTSC-202ENST00000393301 NCAPH2Q6IBW4 605 aa13.75□□□□□ -0.21
CTSC-202ENST00000393301 LLGL2Q6P1M3 1020 aa13.75□□□□□ -0.21
CTSC-202ENST00000393301 ZNF280BQ86YH2 543 aa13.75□□□□□ -0.21
CTSC-202ENST00000393301 UBALD2Q8IYN6 164 aa13.75□□□□□ -0.21
CTSC-202ENST00000393301 RNF149Q8NC42 400 aa13.75□□□□□ -0.21
CTSC-202ENST00000393301 SMG8Q8ND04 991 aaKnown RBP13.75□□□□□ -0.21
CTSC-202ENST00000393301 RIPOR3Q96MK2 946 aa13.75□□□□□ -0.21
CTSC-202ENST00000393301 EIF2AK1Q9BQI3 630 aaKnown RBP13.75□□□□□ -0.21
CTSC-202ENST00000393301 DNAJB4Q9UDY4 337 aa13.75□□□□□ -0.21
CTSC-202ENST00000393301 PCDHA12Q9UN75 941 aa13.75□□□□□ -0.21
CTSC-202ENST00000393301 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.75□□□□□ -0.21
CTSC-202ENST00000393301 DMDP11532 3685 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms