RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 DKC1O60832 514 aaKnown RBP eCLIP11.85□□□□□ -0.51
PDGFD-202ENST00000393158 HMGCRP04035 888 aa11.85□□□□□ -0.51
PDGFD-202ENST00000393158 HOXA11P31270 313 aaPredicted RBP11.85□□□□□ -0.51
PDGFD-202ENST00000393158 PTENP60484 403 aa11.85□□□□□ -0.51
PDGFD-202ENST00000393158 POU5F1BQ06416 359 aa11.85□□□□□ -0.51
PDGFD-202ENST00000393158 ADAM9Q13443 819 aa11.85□□□□□ -0.51
PDGFD-202ENST00000393158 TRIM71Q2Q1W2 868 aaKnown RBP11.85□□□□□ -0.51
PDGFD-202ENST00000393158 WDR59Q6PJI9 974 aa11.85□□□□□ -0.51
PDGFD-202ENST00000393158 ZNF516Q92618 1163 aa11.85□□□□□ -0.51
PDGFD-202ENST00000393158 VPS16Q9H269 839 aa11.85□□□□□ -0.51
PDGFD-202ENST00000393158 ZHX3Q9H4I2 956 aa11.85□□□□□ -0.51
PDGFD-202ENST00000393158 AZI2Q9H6S1 392 aa11.85□□□□□ -0.51
PDGFD-202ENST00000393158 TDRD15B5MCY1 1934 aaKnown RBP11.84□□□□□ -0.51
PDGFD-202ENST00000393158 GOLGA6L19H0YKK7 550 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 CSDE1O75534 798 aaKnown RBP11.84□□□□□ -0.51
PDGFD-202ENST00000393158 GPC3P51654 580 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 MGAT3Q09327 533 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 FAM187BQ17R55 369 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 GDF6Q6KF10 455 aaPredicted RBP11.84□□□□□ -0.51
PDGFD-202ENST00000393158 HVCN1Q96D96 273 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 NRBP2Q9NSY0 501 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 PHLPP2Q6ZVD8 1323 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 A0A0B4J269 797 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 SLC16A3O15427 465 aaKnown RBP11.84□□□□□ -0.51
PDGFD-202ENST00000393158 VTNP04004 478 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 INHAP05111 366 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 KRT18P05783 430 aaKnown RBP11.84□□□□□ -0.51
PDGFD-202ENST00000393158 DMP1Q13316 513 aaPredicted RBP11.84□□□□□ -0.51
PDGFD-202ENST00000393158 MYBPC2Q14324 1141 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 IER5Q5VY09 327 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 ZNF668Q96K58 619 aaPredicted RBP11.84□□□□□ -0.51
PDGFD-202ENST00000393158 NAA15Q9BXJ9 866 aaKnown RBP11.84□□□□□ -0.51
PDGFD-202ENST00000393158 GBP3Q9H0R5 595 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 KMT5AQ9NQR1 393 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 HDAC6Q9UBN7 1215 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 FKTNO75072 461 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 PSEN2P49810 448 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 VWA3BQ502W6 1294 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 FRMD5Q7Z6J6 570 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 TMEM192Q8IY95 271 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 SPC24Q8NBT2 197 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 SLC7A3Q8WY07 619 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 BAP1Q92560 729 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 MFSD14AQ96MC6 490 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 HSPBP1Q9NZL4 362 aa11.84□□□□□ -0.51
PDGFD-202ENST00000393158 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDGFD-202ENST00000393158 PPP3CAQ08209 521 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 TBC1D8BQ0IIM8 1120 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 GPNMBQ14956 572 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 CBWD2Q8IUF1 395 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 LRRC8AQ8IWT6 810 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 NOC3LQ8WTT2 800 aaKnown RBP11.83□□□□□ -0.52
PDGFD-202ENST00000393158 VWCEQ96DN2 955 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 ACO2Q99798 780 aaKnown RBP11.83□□□□□ -0.52
PDGFD-202ENST00000393158 DDX20Q9UHI6 824 aaKnown RBP11.83□□□□□ -0.52
PDGFD-202ENST00000393158 GTF2IRD1Q9UHL9 959 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 PYCARDQ9ULZ3 195 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 NRCAMQ92823 1304 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 UNC80Q8N2C7 3258 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 MICAL3Q7RTP6 2002 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 C5orf42Q9H799 3197 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 A0A1W2PQC6 194 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 GAS2O43903 313 aaKnown RBP11.83□□□□□ -0.52
PDGFD-202ENST00000393158 CPT1AP50416 773 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 KCNA10Q16322 511 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 BRDTQ58F21 947 aaPredicted RBP11.83□□□□□ -0.52
PDGFD-202ENST00000393158 NFRKBQ6P4R8 1299 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 CXCL17Q6UXB2 119 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 TSHZ1Q6ZSZ6 1077 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 GANQ9H2C0 597 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 NDST4Q9H3R1 872 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 SUCLA2Q9P2R7 463 aaPredicted RBP11.83□□□□□ -0.52
PDGFD-202ENST00000393158 PTPN22Q9Y2R2 807 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 MAPK13O15264 365 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 ASGR1P07306 291 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 ALCAMQ13740 583 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 CCDC186Q7Z3E2 898 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 AGPAT5Q9NUQ2 364 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 PCDHB13Q9Y5F0 798 aa11.83□□□□□ -0.52
PDGFD-202ENST00000393158 FNDC1Q4ZHG4 1894 aaPredicted RBP11.83□□□□□ -0.52
PDGFD-202ENST00000393158 NLRP11P59045 1033 aaKnown RBP11.82□□□□□ -0.52
PDGFD-202ENST00000393158 SH3TC2Q8TF17 1288 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 MKNK1Q9BUB5 465 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 FANCGO15287 622 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 TNFSF9P41273 254 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 RBL2Q08999 1139 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 PPFIA1Q13136 1202 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 TRPC6Q9Y210 931 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 A0A087WZ62 844 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 MTFR1Q15390 333 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 MAN2A1Q16706 1144 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 SPECC1LQ69YQ0 1117 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 RHPN2Q8IUC4 686 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 RNF149Q8NC42 400 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 PSPC1Q8WXF1 523 aaKnown RBP11.82□□□□□ -0.52
PDGFD-202ENST00000393158 ACCSQ96QU6 501 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 FDXACB1Q9BRP7 624 aaPredicted RBP11.82□□□□□ -0.52
PDGFD-202ENST00000393158 PCIF1Q9H4Z3 704 aa11.82□□□□□ -0.52
PDGFD-202ENST00000393158 KIAA1671Q9BY89 1806 aa11.81□□□□□ -0.52
PDGFD-202ENST00000393158 MCL1Q07820 350 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms