RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 PCK1P35558 622 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 CAP2P40123 477 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 KAZNQ674X7 775 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 CAPN12Q6ZSI9 719 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 HOOK3Q86VS8 718 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 PASD1Q8IV76 773 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 USP38Q8NB14 1042 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 ZNF668Q96K58 619 aaPredicted RBP11.33□□□□□ -0.6
CALD1-203ENST00000393118 ZIM3Q96PE6 472 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 WDR18Q9BV38 432 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 PIM2Q9P1W9 311 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 TPX2Q9ULW0 747 aaKnown RBP11.33□□□□□ -0.6
CALD1-203ENST00000393118 CCDC188H7C350 402 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 CCND2P30279 289 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 SLC15A2Q16348 729 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 DALRD3Q5D0E6 543 aaKnown RBP11.33□□□□□ -0.6
CALD1-203ENST00000393118 ZNF720Q7Z2F6 126 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 SLC30A5Q8TAD4 765 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 RNPC3Q96LT9 517 aaKnown RBP11.33□□□□□ -0.6
CALD1-203ENST00000393118 AZI2Q9H6S1 392 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 GLI3P10071 1580 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 IFNB1P01574 187 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 ATF7P17544 494 aaPredicted RBP11.33□□□□□ -0.6
CALD1-203ENST00000393118 TMOD1P28289 359 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 IFNAR2P48551 515 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 IRX1P78414 480 aaPredicted RBP11.33□□□□□ -0.6
CALD1-203ENST00000393118 ADCY1Q08828 1119 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 EPC2Q52LR7 807 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 CDAN1Q8IWY9 1227 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 SLC7A3Q8WY07 619 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 KLC4Q9NSK0 619 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 TRAF3IP3Q9Y228 551 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 PCDHB4Q9Y5E5 795 aa11.33□□□□□ -0.6
CALD1-203ENST00000393118 TLR2O60603 784 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 SLC8A1P32418 973 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 OSTNP61366 133 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 PSMC5P62195 406 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 GPC5P78333 572 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 GUCY1A3Q02108 690 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 ZNF394Q53GI3 561 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 TPCN2Q8NHX9 752 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 ARL8AQ96BM9 186 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 ZBTB10Q96DT7 871 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 THOC1Q96FV9 657 aaKnown RBP11.32□□□□□ -0.6
CALD1-203ENST00000393118 AGPAT1Q99943 283 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 FAM114A2Q9NRY5 505 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 FBXL5Q9UKA1 691 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 RASSF10A6NK89 507 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 MARK3P27448 753 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 DGKZQ13574 1117 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 RHOT2Q8IXI1 618 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 ANKRD42Q8N9B4 389 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 THAP2Q9H0W7 228 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 G3BP2Q9UN86 482 aaKnown RBP11.32□□□□□ -0.6
CALD1-203ENST00000393118 DCAF8L1A6NGE4 600 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 SMIM24O75264 130 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 CD58P19256 250 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 ADCY8P40145 1251 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 SOX10P56693 466 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 CUL1Q13616 776 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 GADL1Q6ZQY3 521 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 ZBTB33Q86T24 672 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 ATG4CQ96DT6 458 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 AIPL1Q9NZN9 384 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 CNOT8Q9UFF9 292 aaKnown RBP11.32□□□□□ -0.6
CALD1-203ENST00000393118 ANAPC7Q9UJX3 599 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 C4AP0C0L4 1744 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 C4BP0C0L5 1744 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 ANKRD62A6NC57 917 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 EIF3DO15371 548 aaKnown RBP eCLIP11.32□□□□□ -0.6
CALD1-203ENST00000393118 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
CALD1-203ENST00000393118 MYO1EQ12965 1108 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 SGO2Q562F6 1265 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 HIBCHQ6NVY1 386 aaPredicted RBP11.32□□□□□ -0.6
CALD1-203ENST00000393118 DEFB132Q7Z7B7 95 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 NEK9Q8TD19 979 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 CASKIN2Q8WXE0 1202 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 SH3GL3Q99963 347 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 PI4K2AQ9BTU6 479 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 HEMGNQ9BXL5 484 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 PLCB1Q9NQ66 1216 aa11.32□□□□□ -0.6
CALD1-203ENST00000393118 GAS8O95995 478 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 KRT76Q01546 638 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 POP1Q99575 1024 aaKnown RBP11.31□□□□□ -0.6
CALD1-203ENST00000393118 RIT2Q99578 217 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 CCDC77Q9BR77 488 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 NUP85Q9BW27 656 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 AGTPBP1Q9UPW5 1226 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 ZNF233A6NK53 670 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 K7ERI5 159 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 ITGA4P13612 1032 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 PRLRP16471 622 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 FECHP22830 423 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 MMP14P50281 582 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 JAK3P52333 1124 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 ALCAMQ13740 583 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 PPP2R5EQ16537 467 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 CBWD6Q4V339 395 aa11.31□□□□□ -0.6
CALD1-203ENST00000393118 CBWD3Q5JTY5 395 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms