RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ZNF333Q96JL9 665 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 LIMA1Q9UHB6 759 aaKnown RBP8.13□□□□□ -1.11
VTI1A-201ENST00000393077 CTDP1Q9Y5B0 961 aaPredicted RBP8.13□□□□□ -1.11
VTI1A-201ENST00000393077 N6AMT1Q9Y5N5 214 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 MYOM1P52179 1685 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 HEG1Q9ULI3 1381 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 BTBD18B2RXH4 712 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 RNF113AO15541 343 aaKnown RBP8.13□□□□□ -1.11
VTI1A-201ENST00000393077 PDE8AO60658 829 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 UQCRFS1P1P0C7P4 283 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 GSTT2P0CG29 244 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 GSTT2BP0CG30 244 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 LMNB1P20700 586 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 KRT2P35908 639 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 SKIV2L2P42285 1042 aaKnown RBP8.13□□□□□ -1.11
VTI1A-201ENST00000393077 WASHC5Q12768 1159 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 STK4Q13043 487 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 SPARCL1Q14515 664 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 TPTE2Q6XPS3 522 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 CYP4X1Q8N118 509 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 SDR16C5Q8N3Y7 309 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 SLC26A7Q8TE54 656 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 INPP5DQ92835 1189 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 HSPBAP1Q96EW2 488 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 CEP295NLQ96MC4 621 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 CEP44Q9C0F1 390 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 CSRNP2Q9H175 543 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 DBNLQ9UJU6 430 aaKnown RBP8.13□□□□□ -1.11
VTI1A-201ENST00000393077 DSEQ9UL01 958 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 CNOT3O75175 753 aaKnown RBP8.13□□□□□ -1.11
VTI1A-201ENST00000393077 KRT36O76013 467 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 CYP7A1P22680 504 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 NUP107P57740 925 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 PSMD6Q15008 389 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 TRIP10Q15642 601 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 TMEM214Q6NUQ4 689 aaKnown RBP8.13□□□□□ -1.11
VTI1A-201ENST00000393077 CRACR2BQ8N4Y2 399 aaPredicted RBP8.13□□□□□ -1.11
VTI1A-201ENST00000393077 DDI1Q8WTU0 396 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 ATP2A3Q93084 1043 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 OCEL1Q9H607 264 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 METTL14Q9HCE5 456 aaKnown RBP8.13□□□□□ -1.11
VTI1A-201ENST00000393077 CYTH3O43739 400 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 PSMG1O95456 288 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 MCM7P33993 719 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 PPARGP37231 505 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 RPL5P46777 297 aaKnown RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 CD97P48960 835 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 MRPS15P82914 257 aaKnown RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 AMPD3Q01432 767 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 LPIN1Q14693 890 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 ZNF174Q15697 407 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 ASIC2Q16515 512 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 TMEM63BQ5T3F8 832 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 KAZNQ674X7 775 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 MIGA2Q7L4E1 593 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 SYNE4Q8N205 404 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 OMA1Q96E52 524 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 COX4I2Q96KJ9 171 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 ZHX3Q9H4I2 956 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 AGPAT5Q9NUQ2 364 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 TRNAU1APQ9NX07 287 aaKnown RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 RRN3Q9NYV6 651 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 TELO2Q9Y4R8 837 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 ZC3H4Q9UPT8 1303 aaKnown RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 SYCE1LA8MT33 242 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 F8W031 263 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 AP3B1O00203 1094 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 EIF3FO00303 357 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 TTI1O43156 1089 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 CA4P22748 312 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 RAP1GDS1P52306 607 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 OCRLQ01968 901 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 RALGDSQ12967 914 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 RASGRF1Q13972 1273 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 SLC29A2Q14542 456 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 CNGA3Q16281 694 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 PUS10Q3MIT2 529 aaKnown RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 SEL1L2Q5TEA6 688 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 SYDE2Q5VT97 1194 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 COL23A1Q86Y22 540 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 SUPT20HQ8NEM7 779 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 SLITRK6Q9H5Y7 841 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 GREM2Q9H772 168 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 TBCCD1Q9NVR7 557 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 HACD3Q9P035 362 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 BCAP29Q9UHQ4 241 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 KCNJ14Q9UNX9 436 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 MAP2P11137 1827 aaKnown RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 A0A1W2PQC6 194 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 PEX11AO75192 247 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 PAEPP09466 180 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 EEF1DP29692 281 aaKnown RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 HOXD11P31277 338 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 ECE1P42892 770 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 ZAP70P43403 619 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 CRKLP46109 303 aaKnown RBP8.12□□□□□ -1.11
VTI1A-201ENST00000393077 MXI1P50539 228 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 LMNB2Q03252 620 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 C14orf80Q86SX3 495 aa8.12□□□□□ -1.11
VTI1A-201ENST00000393077 KBTBD3Q8NAB2 608 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms