RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 SENP1Q9P0U3 644 aa8.52□□□□□ -1.05
NCBP3-201ENST00000389005 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.52□□□□□ -1.05
NCBP3-201ENST00000389005 EMSYQ7Z589 1322 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 CNTNAP5Q8WYK1 1306 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 NEXMIFQ5QGS0 1516 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 CDH16O75309 829 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 KLRC1P26715 233 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 HSD17B3P37058 310 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 ST3GAL1Q11201 340 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 ADGRF4Q8IZF3 695 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 CEMIPQ8WUJ3 1361 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 SLC16A4O15374 487 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 CD44P16070 742 aaKnown RBP8.51□□□□□ -1.05
NCBP3-201ENST00000389005 CA8P35219 290 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 PHEXP78562 749 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 RHOT1Q8IXI2 618 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 HACE1Q8IYU2 909 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 COA1Q9GZY4 146 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 KLC2Q9H0B6 622 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 YY1AP1Q9H869 796 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 DBNDD1Q9H9R9 158 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 ATP6V0A4Q9HBG4 840 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 EHD2Q9NZN4 543 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 IFRD2Q12894 506 aaPredicted RBP8.51□□□□□ -1.05
NCBP3-201ENST00000389005 PDIA2Q13087 525 aaKnown RBP8.51□□□□□ -1.05
NCBP3-201ENST00000389005 PRPSAP1Q14558 356 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 PPM1FP49593 454 aaPredicted RBP8.51□□□□□ -1.05
NCBP3-201ENST00000389005 NLGN1Q8N2Q7 840 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 PPM1NQ8N819 430 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 CNKSR1Q969H4 720 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 SGSM3Q96HU1 749 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 MYBL1P10243 752 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 ITKQ08881 620 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 ATL2Q8NHH9 583 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 MYCBPAPQ8TBZ2 947 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 USP21Q9UK80 565 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 SUFUQ9UMX1 484 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 CCDC195A0A1B0GUA6 201 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 WDR64B1ANS9 1081 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 SESTD1Q86VW0 696 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 LACRTQ9GZZ8 138 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 GOLPH3Q9H4A6 298 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 XAB2Q9HCS7 855 aaKnown RBP8.51□□□□□ -1.05
NCBP3-201ENST00000389005 BATF3Q9NR55 127 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 BAG5Q9UL15 447 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 CCND2P30279 289 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 EPHB1P54762 984 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 TFDP2Q14188 446 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 ZBTB33Q86T24 672 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 LRRC43Q8N309 656 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 SYN2Q92777 582 aaPredicted RBP8.51□□□□□ -1.05
NCBP3-201ENST00000389005 AGPAT1Q99943 283 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 NACA2Q9H009 215 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 NGRNQ9NPE2 291 aaKnown RBP8.51□□□□□ -1.05
NCBP3-201ENST00000389005 PRDM4Q9UKN5 801 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 K7ERI5 159 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 TMED1Q13445 227 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 TMCO4Q5TGY1 634 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 CDKAL1Q5VV42 579 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 AGGF1Q8N302 714 aaeCLIP8.51□□□□□ -1.05
NCBP3-201ENST00000389005 ANKS1AQ92625 1134 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 ARL8AQ96BM9 186 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 ZNF18P17022 549 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.51□□□□□ -1.05
NCBP3-201ENST00000389005 HSPH1Q92598 858 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 NSUN4Q96CB9 384 aaKnown RBP8.51□□□□□ -1.05
NCBP3-201ENST00000389005 NPHP3-ACAD11A0A0J9YXS1 232 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 CLEC11AQ9Y240 323 aa8.51□□□□□ -1.05
NCBP3-201ENST00000389005 PAPD7Q5XG87 772 aaKnown RBP8.5□□□□□ -1.05
NCBP3-201ENST00000389005 APEX2Q9UBZ4 518 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 FOXP2O15409 715 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 TLR3O15455 904 aaKnown RBP8.5□□□□□ -1.05
NCBP3-201ENST00000389005 JAK3P52333 1124 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 ERP27Q96DN0 273 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 RAB21Q9UL25 225 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 AKR1B1P15121 316 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 DYNC1I2Q13409 638 aaKnown RBP8.5□□□□□ -1.05
NCBP3-201ENST00000389005 MCPH1Q8NEM0 835 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 EIF2AK1Q9BQI3 630 aaKnown RBP8.5□□□□□ -1.05
NCBP3-201ENST00000389005 HAUS8Q9BT25 410 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 NOD1Q9Y239 953 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 CCND1P24385 295 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 RAB44Q7Z6P3 723 aaPredicted RBP8.5□□□□□ -1.05
NCBP3-201ENST00000389005 TRIM56Q9BRZ2 755 aaKnown RBP8.5□□□□□ -1.05
NCBP3-201ENST00000389005 UPF3AQ9H1J1 476 aaKnown RBP8.5□□□□□ -1.05
NCBP3-201ENST00000389005 DENND3A2RUS2 1198 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 M0QZ92 97 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 TOB1P50616 345 aaPredicted RBP8.5□□□□□ -1.05
NCBP3-201ENST00000389005 CACNB3P54284 484 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 AP2B1P63010 937 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 IGBP1P78318 339 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 PDIA6Q15084 440 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 SPATA31A3Q5VYP0 1347 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 PITPNM2Q9BZ72 1349 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 CD209Q9NNX6 404 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 IP6K2Q9UHH9 426 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 DMGDHQ9UI17 866 aaKnown RBP8.5□□□□□ -1.05
NCBP3-201ENST00000389005 EYA4O95677 639 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 CSF1RP07333 972 aa8.5□□□□□ -1.05
NCBP3-201ENST00000389005 NOP14P78316 857 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms