RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 PPANQ9NQ55 473 aaKnown RBP13.47□□□□□ -0.25
CDX2-201ENST00000381020 KCND2Q9NZV8 630 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 NPTX2P47972 431 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 BPIFB4P59827 614 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 GNGT1P63211 74 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 GPC5P78333 572 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 DHX9Q08211 1270 aaKnown RBP13.47□□□□□ -0.25
CDX2-201ENST00000381020 MAPK6Q16659 721 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 C2CD6Q53TS8 623 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 C1orf186Q6ZWK4 172 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 CPLX4Q7Z7G2 160 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 SPATA33Q96N06 139 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 HEMGNQ9BXL5 484 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 SPON1Q9HCB6 807 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 DMGDHQ9UI17 866 aaKnown RBP13.47□□□□□ -0.25
CDX2-201ENST00000381020 TRAF3IP3Q9Y228 551 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 NEDD9Q14511 834 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 GPD1LQ8N335 351 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 PSPC1Q8WXF1 523 aaKnown RBP13.47□□□□□ -0.25
CDX2-201ENST00000381020 TOPORSQ9NS56 1045 aaPredicted RBP13.47□□□□□ -0.25
CDX2-201ENST00000381020 SNX24Q9Y343 169 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
CDX2-201ENST00000381020 N4BP2Q86UW6 1770 aaPredicted RBP13.46□□□□□ -0.25
CDX2-201ENST00000381020 CYP3A4P08684 503 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 ADCY8P40145 1251 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 PPP2R5CQ13362 524 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 MEA1Q16626 185 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 PCNX4Q63HM2 1172 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 MSANTD4Q8NCY6 345 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 RBM46Q8TBY0 533 aaKnown RBP13.46□□□□□ -0.25
CDX2-201ENST00000381020 RFFLQ8WZ73 363 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 SLC38A10Q9HBR0 1119 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 HGSO14964 777 aaPredicted RBP13.46□□□□□ -0.25
CDX2-201ENST00000381020 TBC1D8O95759 1140 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 GAS8O95995 478 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 CCNA1P78396 465 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 RHOT2Q8IXI1 618 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 MKNK1Q9BUB5 465 aa13.46□□□□□ -0.25
CDX2-201ENST00000381020 NOC2LQ9Y3T9 749 aaKnown RBP13.46□□□□□ -0.25
CDX2-201ENST00000381020 IRS2Q9Y4H2 1338 aa13.46□□□□□ -0.26
CDX2-201ENST00000381020 MYH7P12883 1935 aa13.46□□□□□ -0.26
CDX2-201ENST00000381020 SLC26A4O43511 780 aa13.46□□□□□ -0.26
CDX2-201ENST00000381020 COPB2P35606 906 aa13.46□□□□□ -0.26
CDX2-201ENST00000381020 YARSP54577 528 aaKnown RBP13.46□□□□□ -0.26
CDX2-201ENST00000381020 EMC2Q15006 297 aa13.46□□□□□ -0.26
CDX2-201ENST00000381020 DLK2Q6UY11 383 aa13.46□□□□□ -0.26
CDX2-201ENST00000381020 NLRP7Q8WX94 980 aa13.46□□□□□ -0.26
CDX2-201ENST00000381020 ADPGKQ9BRR6 497 aa13.46□□□□□ -0.26
CDX2-201ENST00000381020 NUP85Q9BW27 656 aa13.46□□□□□ -0.26
CDX2-201ENST00000381020 KCND1Q9NSA2 647 aa13.46□□□□□ -0.26
CDX2-201ENST00000381020 TBX20Q9UMR3 447 aa13.46□□□□□ -0.26
CDX2-201ENST00000381020 PLIN4Q96Q06 1357 aa13.46□□□□□ -0.26
CDX2-201ENST00000381020 COL16A1Q07092 1604 aaPredicted RBP13.46□□□□□ -0.26
CDX2-201ENST00000381020 GOLGA6L7A0A1B0GV03 622 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 TXNP10599 105 aaKnown RBP13.45□□□□□ -0.26
CDX2-201ENST00000381020 SCYL2Q6P3W7 929 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 RUFY4Q6ZNE9 571 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 FAM84AQ96KN4 292 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 CCDC77Q9BR77 488 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 ADAM22Q9P0K1 906 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 VAV3Q9UKW4 847 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 RIPK3Q9Y572 518 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 UBR2Q8IWV8 1755 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 PIK3CDO00329 1044 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 PTPRAP18433 802 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 DMTNQ08495 405 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 TFDP1Q14186 410 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 SGO2Q562F6 1265 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 FAM47CQ5HY64 1035 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 DENND2CQ68D51 928 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 SLFN12LQ6IEE8 588 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 DDX42Q86XP3 938 aaKnown RBP eCLIP13.45□□□□□ -0.26
CDX2-201ENST00000381020 RNF169Q8NCN4 708 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.45□□□□□ -0.26
CDX2-201ENST00000381020 MAK16Q9BXY0 300 aaKnown RBP13.45□□□□□ -0.26
CDX2-201ENST00000381020 OSGEPQ9NPF4 335 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 ZNF148Q9UQR1 794 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 SART1O43290 800 aaKnown RBP13.45□□□□□ -0.26
CDX2-201ENST00000381020 ZSCAN20P17040 1043 aaPredicted RBP13.45□□□□□ -0.26
CDX2-201ENST00000381020 ZNF568Q3ZCX4 644 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 CBWD6Q4V339 395 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 CBWD3Q5JTY5 395 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 CBWD5Q5RIA9 395 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 RSRC2Q7L4I2 434 aaKnown RBP13.45□□□□□ -0.26
CDX2-201ENST00000381020 ZNF564Q8TBZ8 553 aaPredicted RBP13.45□□□□□ -0.26
CDX2-201ENST00000381020 TRPM4Q8TD43 1214 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 BCAS4Q8TDM0 211 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 KCTD10Q9H3F6 313 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 RAB20Q9NX57 234 aa13.45□□□□□ -0.26
CDX2-201ENST00000381020 ADM5C9JUS6 153 aa13.44□□□□□ -0.26
CDX2-201ENST00000381020 SLCO1A2P46721 670 aa13.44□□□□□ -0.26
CDX2-201ENST00000381020 DR1Q01658 176 aa13.44□□□□□ -0.26
CDX2-201ENST00000381020 ANKZF1Q9H8Y5 726 aa13.44□□□□□ -0.26
CDX2-201ENST00000381020 A1CFQ9NQ94 594 aaKnown RBP13.44□□□□□ -0.26
CDX2-201ENST00000381020 COL20A1Q9P218 1284 aa13.44□□□□□ -0.26
CDX2-201ENST00000381020 CASZ1Q86V15 1759 aa13.44□□□□□ -0.26
CDX2-201ENST00000381020 BUB1BO60566 1050 aaPredicted RBP13.44□□□□□ -0.26
CDX2-201ENST00000381020 PLA2G4AP47712 749 aa13.44□□□□□ -0.26
CDX2-201ENST00000381020 CARSP49589 748 aaKnown RBP13.44□□□□□ -0.26
CDX2-201ENST00000381020 DYNLT1P63172 113 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms