RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PTPAQ15257 358 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 FOXD4L6Q3SYB3 417 aaPredicted RBP10.25□□□□□ -0.77
HMGN1-202ENST00000380747 FAM102BQ5T8I3 360 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 FOXD4L3Q6VB84 417 aaPredicted RBP10.25□□□□□ -0.77
HMGN1-202ENST00000380747 CABP7Q86V35 215 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 RNF149Q8NC42 400 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 MCPH1Q8NEM0 835 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 RASSF8Q8NHQ8 419 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 ASAP3Q8TDY4 903 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 TOP1MTQ969P6 601 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 ZNF396Q96N95 335 aaPredicted RBP10.25□□□□□ -0.77
HMGN1-202ENST00000380747 PNMA5Q96PV4 448 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 USP28Q96RU2 1077 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 YME1L1Q96TA2 773 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 RAD9AQ99638 391 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 ADAM2Q99965 735 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 MMTAG2Q9BU76 263 aaKnown RBP10.25□□□□□ -0.77
HMGN1-202ENST00000380747 INO80BQ9C086 356 aaPredicted RBP10.25□□□□□ -0.77
HMGN1-202ENST00000380747 GPRC5CQ9NQ84 441 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 LRFN2Q9ULH4 789 aa10.25□□□□□ -0.77
HMGN1-202ENST00000380747 LCHNA4D1U4 455 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 RFXAPO00287 272 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 LPXNO60711 386 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 EYA4O95677 639 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 SSBP05455 408 aaKnown RBP eCLIP10.24□□□□□ -0.77
HMGN1-202ENST00000380747 STAG3L1P0CL83 205 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 ZSCAN20P17040 1043 aaPredicted RBP10.24□□□□□ -0.77
HMGN1-202ENST00000380747 CYP11B2P19099 503 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 SFPQP23246 707 aaKnown RBP eCLIP10.24□□□□□ -0.77
HMGN1-202ENST00000380747 ARL2P36404 184 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 LONP1P36776 959 aaKnown RBP10.24□□□□□ -0.77
HMGN1-202ENST00000380747 PHKA2P46019 1235 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 GRB10Q13322 594 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 PKP1Q13835 747 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 CAPSQ13938 189 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 MXD4Q14582 209 aaPredicted RBP10.24□□□□□ -0.77
HMGN1-202ENST00000380747 STK38Q15208 465 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 CATSPER4Q7RTX7 472 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 KCNK18Q7Z418 384 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 NPAS4Q8IUM7 802 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 CALML4Q96GE6 196 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 AK8Q96MA6 479 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 HS3ST6Q96QI5 342 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 SLC4A5Q9BY07 1137 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 CERS4Q9HA82 394 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 IFT122Q9HBG6 1241 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 RGS18Q9NS28 235 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 C1orf112Q9NSG2 853 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 TFIP11Q9UBB9 837 aaKnown RBP10.24□□□□□ -0.77
HMGN1-202ENST00000380747 RABGEF1Q9UJ41 708 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 INSL6Q9Y581 213 aa10.24□□□□□ -0.77
HMGN1-202ENST00000380747 LRRIQ4A6NIV6 560 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 PRR33A8MZF0 331 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 ARHGEF15O94989 841 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 GLRA2P23416 452 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 SARSP49591 514 aaKnown RBP10.23□□□□□ -0.77
HMGN1-202ENST00000380747 DSC3Q14574 896 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 SLC39A14Q15043 492 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 SLC24A5Q71RS6 500 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 SRGAP1Q7Z6B7 1085 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 RNF169Q8NCN4 708 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 ARNTL2Q8WYA1 636 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 NT5C3AQ9H0P0 336 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 CSRNP2Q9H175 543 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 POLD4Q9HCU8 107 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 FBXO2Q9UK22 296 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-202ENST00000380747 PIN4Q9Y237 131 aaKnown RBP10.23□□□□□ -0.77
HMGN1-202ENST00000380747 PCDHB7Q9Y5E2 793 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 USP34Q70CQ2 3546 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 EVPLQ92817 2033 aa10.23□□□□□ -0.77
HMGN1-202ENST00000380747 ARID2Q68CP9 1835 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 LINC01553A4QN01 128 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 C9IYK1 514 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 INO80B-WBP1J3KQ70 363 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 SLC26A4O43511 780 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 DGKIO75912 1065 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 ERLIN2O94905 339 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 LIG1P18858 919 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 NASPP49321 788 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-202ENST00000380747 PTENP60484 403 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 HTRA4P83105 476 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-202ENST00000380747 KARSQ15046 597 aaKnown RBP10.22□□□□□ -0.77
HMGN1-202ENST00000380747 TMEM119Q4V9L6 283 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 PAN2Q504Q3 1202 aaKnown RBP10.22□□□□□ -0.77
HMGN1-202ENST00000380747 SPECC1Q5M775 1068 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 HYIQ5T013 277 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 LCE2DQ5TA82 110 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-202ENST00000380747 TWF2Q6IBS0 349 aaKnown RBP10.22□□□□□ -0.77
HMGN1-202ENST00000380747 FAM43BQ6ZT52 329 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-202ENST00000380747 SPRED2Q7Z698 418 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 PCMTD1Q96MG8 357 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-202ENST00000380747 CLIC6Q96NY7 704 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 RUSC1Q9BVN2 902 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 MINDY3Q9H8M7 445 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 DACT1Q9NYF0 836 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 MTUS1Q9ULD2 1270 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 VPS9D1Q9Y2B5 631 aa10.22□□□□□ -0.77
HMGN1-202ENST00000380747 SRPRBQ9Y5M8 271 aaKnown RBP10.22□□□□□ -0.77
HMGN1-202ENST00000380747 MICAL3Q7RTP6 2002 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms