RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 WASHC2DQ5SRD0 308 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 TRIM67Q6ZTA4 783 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 SMYD4Q8IYR2 804 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 NLGN1Q8N2Q7 840 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 SYT2Q8N9I0 419 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 TBC1D16Q8TBP0 767 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 SH3TC2Q8TF17 1288 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 GAB3Q8WWW8 586 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 OLFM3Q96PB7 478 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 RIOK1Q9BRS2 568 aaKnown RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 LRMDAQ9H2I8 198 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 DENND2DQ9H6A0 471 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 SH2D4AQ9H788 454 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 NHEJ1Q9H9Q4 299 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 LY9Q9HBG7 655 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 HPS5Q9UPZ3 1129 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 FADS3Q9Y5Q0 445 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 EP400Q96L91 3159 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 O00370 1275 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 POLR2DO15514 142 aaKnown RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 KCNQ2O43526 872 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 ENDOUP21128 410 aaKnown RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 TM4SF1P30408 202 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 IARSP41252 1262 aaKnown RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 CCT8P50990 548 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 LMNB2Q03252 620 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 MGAT5Q09328 741 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 DPYDQ12882 1025 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 C6orf183Q5T699 404 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 LRRC8BQ6P9F7 803 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 DDX42Q86XP3 938 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 KRI1Q8N9T8 703 aaKnown RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 ZNF579Q8NAF0 562 aaKnown RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 HSPBAP1Q96EW2 488 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 DYDC2Q96IM9 177 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 SH3GL1Q99961 368 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 UBAC1Q9BSL1 405 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 TPK1Q9H3S4 243 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 SH3GLB2Q9NR46 395 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 INTS9Q9NV88 658 aaKnown RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 ATAD3AQ9NVI7 634 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 FGFR1OP2Q9NVK5 253 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 FAM205AQ6ZU69 1335 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 SPDYE16A6NNV3 312 aaPredicted RBP8.02□□□□□ -1.12
CDKL5-201ENST00000379989 BTBD19C9JJ37 291 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 hCG_1984214I3L0E3 225 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 OXSR1O95747 527 aaPredicted RBP8.02□□□□□ -1.12
CDKL5-201ENST00000379989 IL1R1P14778 569 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 TRAPPC10P48553 1259 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 PTK7Q13308 1070 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 RILPL1Q5EBL4 403 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 KLHL35Q6PF15 583 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 KRT26Q7Z3Y9 468 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 KBTBD2Q8IY47 623 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 SEPT12Q8IYM1 358 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 TMCO5AQ8N6Q1 288 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 ZNF713Q8N859 430 aaPredicted RBP8.02□□□□□ -1.12
CDKL5-201ENST00000379989 GDAP1Q8TB36 358 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 FNDC8Q8TC99 324 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 TMEM237Q96Q45 408 aa8.02□□□□□ -1.12
CDKL5-201ENST00000379989 FOCADQ5VW36 1801 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 SMIM23A6NLE4 172 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 PPP1R3GB7ZBB8 358 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 SCG2P13521 617 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 UBXN1Q04323 297 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 GIT2Q14161 759 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 DGKHQ86XP1 1220 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 SYNE4Q8N205 404 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 AGGF1Q8N302 714 aaeCLIP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 EIF1ADQ8N9N8 165 aaKnown RBP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 LSM14AQ8ND56 463 aaKnown RBP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 CGREF1Q99674 301 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 ASCC2Q9H1I8 757 aaPredicted RBP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 METTL5Q9NRN9 209 aaKnown RBP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 PTTG2Q9NZH5 202 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 CAPN11Q9UMQ6 739 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 PRELID1Q9Y255 219 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 ARL2BPQ9Y2Y0 163 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 TSC22D4Q9Y3Q8 395 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 OR6B1O95007 311 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 RXRGP48443 463 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 CCR3P51677 355 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 NEK3P51956 506 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 GRIN1Q05586 938 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 MTMR3Q13615 1198 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 CYLC2Q14093 348 aaPredicted RBP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 KIF22Q14807 665 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 KHDC1Q4VXA5 237 aaKnown RBP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 PDCD4Q53EL6 469 aaKnown RBP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 TMEM214Q6NUQ4 689 aaKnown RBP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 RPGRQ92834 1020 aaKnown RBP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 NSUN4Q96CB9 384 aaKnown RBP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 NAP1L3Q99457 506 aaPredicted RBP8.02□□□□□ -1.13
CDKL5-201ENST00000379989 DRC3Q9H069 523 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 NRDE2Q9H7Z3 1164 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 EURLQ9NYK6 297 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 CLIC5Q9NZA1 410 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 PRKAG3Q9UGI9 489 aa8.02□□□□□ -1.13
CDKL5-201ENST00000379989 TTLL3Q9Y4R7 772 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms