RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 GKAP1Q5VSY0 366 aaPredicted RBP16.68■□□□□ 0.26
FXN-201ENST00000377270 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
FXN-201ENST00000377270 KIAA0895Q8NCT3 520 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 CNOT6LQ96LI5 555 aaKnown RBP16.68■□□□□ 0.26
FXN-201ENST00000377270 TUBA8Q9NY65 449 aaPredicted RBP16.68■□□□□ 0.26
FXN-201ENST00000377270 DDX25Q9UHL0 483 aaKnown RBP16.68■□□□□ 0.26
FXN-201ENST00000377270 HYOU1Q9Y4L1 999 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 TIMM22Q9Y584 194 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 ATP6V1C1P21283 382 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 NFKBIAP25963 317 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 PPP1R2P41236 205 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 MTIF2P46199 727 aaKnown RBP16.67■□□□□ 0.26
FXN-201ENST00000377270 KRT72Q14CN4 511 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 SLC43A3Q8NBI5 491 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 GJA10Q969M2 543 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 DDTLA6NHG4 134 aaPredicted RBP16.67■□□□□ 0.26
FXN-201ENST00000377270 PDGFRBP09619 1106 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 EEF2P13639 858 aaKnown RBP16.67■□□□□ 0.26
FXN-201ENST00000377270 NQO1P15559 274 aaKnown RBP16.67■□□□□ 0.26
FXN-201ENST00000377270 NEK2P51955 445 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 CYP27A1Q02318 531 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 SEPT2Q15019 361 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 CERKLQ49MI3 558 aaPredicted RBP16.67■□□□□ 0.26
FXN-201ENST00000377270 NFRKBQ6P4R8 1299 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 C2CD5Q86YS7 1000 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 SMARCAL1Q9NZC9 954 aa16.67■□□□□ 0.26
FXN-201ENST00000377270 SPATA31D3P0C874 917 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 TROVE2P10155 538 aaKnown RBP eCLIP16.66■□□□□ 0.26
FXN-201ENST00000377270 SH2D4BQ5SQS7 431 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 SPATA31D4Q6ZUB0 917 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 IFT81Q8WYA0 676 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 MTMR8Q96EF0 704 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 SEMA6BQ9H3T3 888 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 TMBIM4Q9HC24 238 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 RBM12Q9NTZ6 932 aaKnown RBP16.66■□□□□ 0.26
FXN-201ENST00000377270 CAPN6Q9Y6Q1 641 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 PLSCR1O15162 318 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 GLI1P08151 1106 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 SLC1A4P43007 532 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 UNC13DQ70J99 1090 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 RAD54LQ92698 747 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 AZIN2Q96A70 460 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 NOC4LQ9BVI4 516 aaKnown RBP16.66■□□□□ 0.26
FXN-201ENST00000377270 DHX36Q9H2U1 1008 aaKnown RBP16.66■□□□□ 0.26
FXN-201ENST00000377270 SUCLA2Q9P2R7 463 aaPredicted RBP16.66■□□□□ 0.26
FXN-201ENST00000377270 PI4KBQ9UBF8 816 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 PVALEFA0A1B0GWK0 134 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 USP17L15C9J2P7 530 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 USP17L13C9JLJ4 530 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 USP17L11C9JVI0 530 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 USP17L18D6R9N7 530 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 USP17L22D6RA61 530 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 USP17L17D6RBQ6 530 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 USP17L19D6RCP7 530 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 USP17L20D6RJB6 530 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 SERPINB4P48594 390 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 GUCY2FP51841 1108 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 USP17L24Q0WX57 530 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 STRIP1Q5VSL9 837 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 USP17L6PQ6QN14 398 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 RUFY4Q6ZNE9 571 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 KCNK18Q7Z418 384 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 ANKK1Q8NFD2 765 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 FLAD1Q8NFF5 587 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 HAS1Q92839 578 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 PPP1R14BQ96C90 147 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 PCMTD1Q96MG8 357 aaPredicted RBP16.66■□□□□ 0.26
FXN-201ENST00000377270 UIMC1Q96RL1 719 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 EPB41L5Q9HCM4 733 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 EHD2Q9NZN4 543 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 ADAM22Q9P0K1 906 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 FAM198AQ9UFP1 575 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 DAAM1Q9Y4D1 1078 aa16.66■□□□□ 0.26
FXN-201ENST00000377270 VDRP11473 427 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 CXCR5P32302 372 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 KLK7P49862 253 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 USP11P51784 963 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 QRICH1Q2TAL8 776 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 SLFN13Q68D06 897 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 TMCO5AQ8N6Q1 288 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 AGPAT5Q9NUQ2 364 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 MKS1Q9NXB0 559 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 SLC12A6Q9UHW9 1150 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 PLAAQ9Y263 795 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 NRXN2Q9P2S2 1712 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 ECE2O60344 883 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 CD97P48960 835 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 PDE6CP51160 858 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 GUCY2DQ02846 1103 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 SPA17Q15506 151 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 FXNQ16595 210 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 ECM1Q16610 540 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 COBLL1Q53SF7 1204 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 FAM133BQ5BKY9 247 aaKnown RBP16.65■□□□□ 0.26
FXN-201ENST00000377270 DACT2Q5SW24 774 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 CENPPQ6IPU0 288 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 SLC2A7Q6PXP3 512 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 SH3BP5LQ7L8J4 393 aa16.65■□□□□ 0.26
FXN-201ENST00000377270 WDR75Q8IWA0 830 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms