RNA–Protein interactions for RNA: ENST00000375779.6

CLIC1-206, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIC1, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-206ENST00000375779 LIMCH1Q9UPQ0 1083 aa16.33■□□□□ 0.2
CLIC1-206ENST00000375779 PIN4Q9Y237 131 aaKnown RBP16.33■□□□□ 0.2
CLIC1-206ENST00000375779 PCDHB2Q9Y5E7 798 aa16.33■□□□□ 0.2
CLIC1-206ENST00000375779 B4GALT3O60512 393 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 NCLP19338 710 aaKnown RBP16.32■□□□□ 0.2
CLIC1-206ENST00000375779 RARRES1P49788 294 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 AFF1P51825 1210 aaKnown RBP16.32■□□□□ 0.2
CLIC1-206ENST00000375779 ORC2Q13416 577 aaPredicted RBP16.32■□□□□ 0.2
CLIC1-206ENST00000375779 CALCRLQ16602 461 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 XKR9Q5GH70 373 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 NCAPH2Q6IBW4 605 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 TMC7Q7Z402 723 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 TMEM173Q86WV6 379 aaPredicted RBP16.32■□□□□ 0.2
CLIC1-206ENST00000375779 TPH2Q8IWU9 490 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 RNF149Q8NC42 400 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 SMG8Q8ND04 991 aaKnown RBP16.32■□□□□ 0.2
CLIC1-206ENST00000375779 EDAQ92838 391 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 SNX21Q969T3 373 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 PGBD4Q96DM1 585 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 NLRP4Q96MN2 994 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 TMEM60Q9H2L4 133 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 KANSL3Q9P2N6 904 aa16.32■□□□□ 0.2
CLIC1-206ENST00000375779 CNTNAP2Q9UHC6 1331 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 FAM86C2PA6NEL3 165 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 NT5C1B-RDH14C9J2C7 533 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 CLASP2O75122 1294 aaKnown RBP16.31■□□□□ 0.2
CLIC1-206ENST00000375779 DGAT1O75907 488 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 DDHD2O94830 711 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 SRGAP2CP0DJJ0 459 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 CTSAP10619 480 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 IBSPP21815 317 aaPredicted RBP16.31■□□□□ 0.2
CLIC1-206ENST00000375779 CYP4A11Q02928 519 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 PLPP4Q5VZY2 271 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 POTEHQ6S545 545 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 GLB1LQ6UWU2 654 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 ZNF280BQ86YH2 543 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 C4orf32Q8N8J7 132 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 CNNM3Q8NE01 707 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 VN1R3Q9BXE9 311 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 HCFC2Q9Y5Z7 792 aa16.31■□□□□ 0.2
CLIC1-206ENST00000375779 NEMFO60524 1076 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 PAPLNO95428 1278 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 CXCL14O95715 111 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 GIT2Q14161 759 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 SMC1AQ14683 1233 aaKnown RBP16.3■□□□□ 0.2
CLIC1-206ENST00000375779 CATSPER3Q86XQ3 398 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 RNF168Q8IYW5 571 aaPredicted RBP16.3■□□□□ 0.2
CLIC1-206ENST00000375779 RNF169Q8NCN4 708 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 FBXO18Q8NFZ0 1043 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 SLC22A17Q8WUG5 538 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 BCL7CQ8WUZ0 217 aaPredicted RBP16.3■□□□□ 0.2
CLIC1-206ENST00000375779 CCDC51Q96ER9 411 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 MTRQ99707 1265 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 TMEM175Q9BSA9 504 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 POLR3CQ9BUI4 534 aaPredicted RBP16.3■□□□□ 0.2
CLIC1-206ENST00000375779 KCNH6Q9H252 994 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 FOXP1Q9H334 677 aaPredicted RBP16.3■□□□□ 0.2
CLIC1-206ENST00000375779 UBN1Q9NPG3 1134 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 DNAJB4Q9UDY4 337 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 STK39Q9UEW8 545 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 DBR1Q9UK59 544 aaKnown RBP16.3■□□□□ 0.2
CLIC1-206ENST00000375779 ZDBF2Q9HCK1 2354 aa16.3■□□□□ 0.2
CLIC1-206ENST00000375779 A0A1B0GUA9 196 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 MARCH6O60337 910 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 TSPAN1O60635 241 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 CSPG5O95196 566 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 ALDH2P05091 517 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 MUTP22033 750 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 GLRA2P23416 452 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 TXKP42681 527 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 MBTD1Q05BQ5 628 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 ITIH3Q06033 890 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 DSC1Q08554 894 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 BECN1Q14457 450 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 VPS52Q8N1B4 723 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 GSTCDQ8NEC7 633 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 CASP10Q92851 521 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 TMEM169Q96HH4 297 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 ZSCAN31Q96LW9 406 aaPredicted RBP16.29■□□□□ 0.2
CLIC1-206ENST00000375779 ADAM7Q9H2U9 754 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 RSAD1Q9HA92 442 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 TUFT1Q9NNX1 390 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 ENTPD7Q9NQZ7 604 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 DAXXQ9UER7 740 aaPredicted RBP16.29■□□□□ 0.2
CLIC1-206ENST00000375779 MUTYHQ9UIF7 546 aa16.29■□□□□ 0.2
CLIC1-206ENST00000375779 U2AF2P26368 475 aaKnown RBP eCLIP16.28■□□□□ 0.2
CLIC1-206ENST00000375779 RPA1P27694 616 aa16.28■□□□□ 0.2
CLIC1-206ENST00000375779 TECP42680 631 aa16.28■□□□□ 0.2
CLIC1-206ENST00000375779 SLC11A1P49279 550 aa16.28■□□□□ 0.2
CLIC1-206ENST00000375779 CAPSQ13938 189 aa16.28■□□□□ 0.2
CLIC1-206ENST00000375779 FAM187BQ17R55 369 aa16.28■□□□□ 0.2
CLIC1-206ENST00000375779 GPR65Q8IYL9 337 aa16.28■□□□□ 0.2
CLIC1-206ENST00000375779 ASAP3Q8TDY4 903 aa16.28■□□□□ 0.2
CLIC1-206ENST00000375779 CSRNP2Q9H175 543 aa16.28■□□□□ 0.2
CLIC1-206ENST00000375779 FZD8Q9H461 694 aa16.28■□□□□ 0.2
CLIC1-206ENST00000375779 MIOSQ9NXC5 875 aa16.28■□□□□ 0.2
CLIC1-206ENST00000375779 ZMYM2Q9UBW7 1377 aa16.27■□□□□ 0.2
CLIC1-206ENST00000375779 ZC3H11AO75152 810 aaKnown RBP eCLIP16.27■□□□□ 0.24e-16■■□□□ 13.1
CLIC1-206ENST00000375779 MED24O75448 989 aa16.27■□□□□ 0.2
CLIC1-206ENST00000375779 CD2BP2O95400 341 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms