RNA–Protein interactions for RNA: ENST00000374940.3

HLA-DQA2-210, Transcript of major histocompatibility complex, class II, DQ alpha 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA2, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2-210ENST00000374940 SYKP43405 635 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 RABGGTBP53611 331 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 NOTUMQ6P988 496 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 CEP57L1Q8IYX8 460 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 CRIPAKQ8N1N5 446 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 FSIP1Q8NA03 581 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 DNAJC19Q96DA6 116 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 CCDC51Q96ER9 411 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 LRCH3Q96II8 777 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 CCDC113Q9H0I3 377 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 ZHX3Q9H4I2 956 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 TMEM161AQ9NX61 479 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 ARHGAP28Q9P2N2 729 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 PCDHB7Q9Y5E2 793 aa13.53□□□□□ -0.24
HLA-DQA2-210ENST00000374940 SLC16A4O15374 487 aa13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 TRAK2O60296 914 aa13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 ARF4P18085 180 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 FXR1P51114 621 aaKnown RBP eCLIP13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 RAB27AP51159 221 aa13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 NDUFA8P51970 172 aa13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 HTRA4P83105 476 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 PRPF4BQ13523 1007 aaKnown RBP13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 GPR153Q6NV75 609 aa13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 SLC17A8Q8NDX2 589 aa13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 STAMQ92783 540 aa13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 YME1L1Q96TA2 773 aa13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 TRIM9Q9C026 710 aa13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 SERTAD1Q9UHV2 236 aa13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 CNTNAP2Q9UHC6 1331 aa13.52□□□□□ -0.25
HLA-DQA2-210ENST00000374940 A0A1B0GUA9 196 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 B4GALT5O43286 388 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 ACTN4O43707 911 aaKnown RBP13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 ZNF623O75123 536 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 DGKIO75912 1065 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 EOMESO95936 686 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 GAP43P17677 238 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 LIG1P18858 919 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 IBSPP21815 317 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 ABCD1P33897 745 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 NCKAP1LP55160 1127 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 LONRF3Q496Y0 759 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 CNNM4Q6P4Q7 775 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 ECHDC2Q86YB7 292 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 FAM178BQ8IXR5 827 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 TMEM161BQ8NDZ6 487 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 CNNM3Q8NE01 707 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 KCNN1Q92952 543 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 TIFAQ96CG3 184 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 CPB2Q96IY4 423 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 C7orf25Q9BPX7 421 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 FAM105AQ9NUU6 356 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 SEL1LQ9UBV2 794 aa13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 YBX2Q9Y2T7 364 aaKnown RBP13.51□□□□□ -0.25
HLA-DQA2-210ENST00000374940 TMEM265A0A087WTH1 108 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 FRMD3A2A2Y4 597 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 HOXA2O43364 376 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 MAPTP10636 758 aaKnown RBP13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 IDEP14735 1019 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 MYOGP15173 224 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 STRN3Q13033 797 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 TMEM132AQ24JP5 1023 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 UBXN11Q5T124 520 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 SLC27A1Q6PCB7 646 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 HAUS6Q7Z4H7 955 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 ZNF598Q86UK7 904 aaKnown RBP13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 CCDC65Q8IXS2 484 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 ZNF689Q96CS4 500 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 PGBD4Q96DM1 585 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 NKX2-4Q9H2Z4 354 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 GOLPH3LQ9H4A5 285 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 SLC28A3Q9HAS3 691 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 RC3H2Q9HBD1 1191 aaKnown RBP13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 PCDHB2Q9Y5E7 798 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 TCHHQ07283 1943 aa13.5□□□□□ -0.25
HLA-DQA2-210ENST00000374940 K7ENM7 598 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 N4BP3O15049 544 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 CA3P07451 260 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 HERC4Q5GLZ8 1057 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 TAS1R3Q7RTX0 852 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 MRPL10Q7Z7H8 261 aaKnown RBP13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 SFR1Q86XK3 245 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 RNF169Q8NCN4 708 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 CCDC34Q96HJ3 373 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 FIZ1Q96SL8 496 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 MRPL4Q9BYD3 311 aaKnown RBP13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 TRIM6Q9C030 488 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 ST6GALNAC4Q9H4F1 302 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 OLFML3Q9NRN5 406 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 PANK4Q9NVE7 773 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 PTPRSQ13332 1948 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 LCHNA4D1U4 455 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 ZNF202O95125 648 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 EDN1P05305 212 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 MYL1P05976 194 aa13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 ATF7P17544 494 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQA2-210ENST00000374940 AFMP43652 599 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms