RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 DNERQ8NFT8 737 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 FAM71BQ8TC56 605 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 LSM14BQ9BX40 385 aaKnown RBP11.58□□□□□ -0.56
TPM3-212ENST00000368533 PNMA2Q9UL42 364 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 MYH9P35579 1960 aaKnown RBP11.57□□□□□ -0.56
TPM3-212ENST00000368533 IGF2BP3O00425 579 aaKnown RBP eCLIP11.57□□□□□ -0.561e-7■■■■□ 23.3
TPM3-212ENST00000368533 CSDE1O75534 798 aaKnown RBP11.57□□□□□ -0.56
TPM3-212ENST00000368533 NEBLO76041 1014 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 FGFR1OPO95684 399 aaKnown RBP11.57□□□□□ -0.56
TPM3-212ENST00000368533 SUPT20HL2P0C7V6 817 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 SLC9A1P19634 815 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 SFNP31947 248 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 EIF4A3P38919 411 aaKnown RBP11.57□□□□□ -0.56
TPM3-212ENST00000368533 PPP1R2P41236 205 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 POLGP54098 1239 aaPredicted RBP11.57□□□□□ -0.56
TPM3-212ENST00000368533 AMPD2Q01433 879 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 KCNH2Q12809 1159 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 MIS18BP1Q6P0N0 1132 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 TRAPPC11Q7Z392 1133 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 HAUS6Q7Z4H7 955 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 C4orf19Q8IY42 314 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 GIMAP7Q8NHV1 300 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 SPATA33Q96N06 139 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 LARSQ9P2J5 1176 aaKnown RBP11.57□□□□□ -0.56
TPM3-212ENST00000368533 ABT1Q9ULW3 272 aaKnown RBP11.57□□□□□ -0.56
TPM3-212ENST00000368533 ADGRA3Q8IWK6 1321 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 LAMA2P24043 3122 aaKnown RBP11.57□□□□□ -0.56
TPM3-212ENST00000368533 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.57□□□□□ -0.56
TPM3-212ENST00000368533 GSTTP1A0A1W2PQM5 241 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 H0YHG0 523 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 EXOC3O60645 756 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 CXCR5P32302 372 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 ADCYAP1R1P41586 468 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 SEZ6Q53EL9 994 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 NAIF1Q69YI7 327 aaPredicted RBP11.57□□□□□ -0.56
TPM3-212ENST00000368533 ARMCX2Q7L311 632 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 ATP6V0A1Q93050 837 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 PCYT2Q99447 389 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 ACBD3Q9H3P7 528 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 CENPHQ9H3R5 247 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 ARMCX3Q9UH62 379 aaPredicted RBP11.57□□□□□ -0.56
TPM3-212ENST00000368533 STK24Q9Y6E0 443 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 SYNGAP1Q96PV0 1343 aa11.57□□□□□ -0.56
TPM3-212ENST00000368533 ZNFX1Q9P2E3 1918 aaKnown RBP11.56□□□□□ -0.56
TPM3-212ENST00000368533 TACC1O75410 805 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 CLSTN1O94985 981 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 MOCS3O95396 460 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 SLC25A27O95847 323 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 ITGBL1O95965 494 aaPredicted RBP11.56□□□□□ -0.56
TPM3-212ENST00000368533 POLR2FP61218 127 aaKnown RBP11.56□□□□□ -0.56
TPM3-212ENST00000368533 CKAP4Q07065 602 aaKnown RBP11.56□□□□□ -0.56
TPM3-212ENST00000368533 ACTN3Q08043 901 aaPredicted RBP11.56□□□□□ -0.56
TPM3-212ENST00000368533 KCNMA1Q12791 1236 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 BIRC2Q13490 618 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 CCDC70Q6NSX1 233 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 CCDC170Q8IYT3 715 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 IWS1Q96ST2 819 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 XPNPEP1Q9NQW7 623 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 CYP26B1Q9NR63 512 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 TYW1Q9NV66 732 aaKnown RBP11.56□□□□□ -0.56
TPM3-212ENST00000368533 RAB21Q9UL25 225 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 PNMA3Q9UL41 463 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 DENND3A2RUS2 1198 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 LRRIQ4A6NIV6 560 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 CALUO43852 315 aaPredicted RBP11.56□□□□□ -0.56
TPM3-212ENST00000368533 SKAP2O75563 359 aaPredicted RBP11.56□□□□□ -0.56
TPM3-212ENST00000368533 GAP43P17677 238 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 NPTX2P47972 431 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 DLG4P78352 724 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 C2orf54Q08AI8 447 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 CCDC181Q5TID7 509 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 CDR2LQ86X02 465 aaPredicted RBP11.56□□□□□ -0.56
TPM3-212ENST00000368533 HNRNPLLQ8WVV9 542 aaKnown RBP11.56□□□□□ -0.56
TPM3-212ENST00000368533 CCDC127Q96BQ5 260 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 BICD1Q96G01 975 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 CDHR1Q96JP9 859 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 POLR3FQ9H1D9 316 aaPredicted RBP11.56□□□□□ -0.56
TPM3-212ENST00000368533 AGPAT3Q9NRZ7 376 aa11.56□□□□□ -0.56
TPM3-212ENST00000368533 ZC3H4Q9UPT8 1303 aaKnown RBP11.56□□□□□ -0.56
TPM3-212ENST00000368533 LRRC53A6NM62 1247 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 ANKRD63C9JTQ0 380 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 EBAG9O00559 213 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 ZNF286BP0CG31 522 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 MAGEA1P43355 309 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 STAT5BP51692 787 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 MEA1Q16626 185 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 HS2ST1Q7LGA3 356 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 FAM186BQ8IYM0 893 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 NEK9Q8TD19 979 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 BCAS4Q8TDM0 211 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 N4BP2L2Q92802 583 aaPredicted RBP11.55□□□□□ -0.56
TPM3-212ENST00000368533 POP1Q99575 1024 aaKnown RBP11.55□□□□□ -0.56
TPM3-212ENST00000368533 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.55□□□□□ -0.56
TPM3-212ENST00000368533 KMT5AQ9NQR1 393 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 OLFML3Q9NRN5 406 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 PCDHA13Q9Y5I0 950 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 KIF1CO43896 1103 aaKnown RBP11.55□□□□□ -0.56
TPM3-212ENST00000368533 PLS3P13797 630 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 KIF11P52732 1056 aa11.55□□□□□ -0.56
TPM3-212ENST00000368533 VAV2P52735 878 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms